Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0834
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.7  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 469 NVITIYETMLIYSFE*IFFPYVILGRLRGYSNYGR 573
           NV+ +   +L Y  E I+F  ++LG L   S+  R
Sbjct: 443 NVLGVQGALLSYFIEPIYFHSIVLGSLLNPSHMYR 477


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 308 TAISSIFSKQLTLECNWKGFCLLPRLQKV 222
           T  ++I S  +   CN+K +CL   L  +
Sbjct: 129 TTSTTIVSGAMAERCNFKAYCLFSFLNTI 157


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 136 AQHNRRSEWTYLYINKK*HQIHSYLS 59
           A+ NR+  W Y Y  K  H I   +S
Sbjct: 429 AKVNRQPVWFYYYTYKGAHSISEIMS 454


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 136 AQHNRRSEWTYLYINKK*HQIHSYLS 59
           A+ NR+  W Y Y  K  H I   +S
Sbjct: 429 AKVNRQPVWFYYYTYKGAHSISEIMS 454


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,760
Number of Sequences: 438
Number of extensions: 4674
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)