Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0833
         (721 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    44   0.004
UniRef50_Q1VPN6 Cluster: Putative uncharacterized protein; n=2; ...    33   9.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 383 FLLLRWVDKITGHLVLRDYWSP 448
           FLLLRWVD++T HLVL  YWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175



 Score = 33.5 bits (73), Expect = 5.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 427 VKGLLEPINIYNVNAPPTLRYKF 495
           + G   P ++Y+VNAPPT RYKF
Sbjct: 169 LSGYWSPRHLYDVNAPPTSRYKF 191


>UniRef50_Q1VPN6 Cluster: Putative uncharacterized protein; n=2;
           Bacteroidetes|Rep: Putative uncharacterized protein -
           Psychroflexus torquis ATCC 700755
          Length = 550

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 26  RAQNPNLTKSNSKISVLIYLQLMYKQ 103
           RAQ+PNLT S+ + +  +Y+ L YK+
Sbjct: 487 RAQHPNLTSSDIRFTTFLYMNLTYKE 512


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,176,287
Number of Sequences: 1657284
Number of extensions: 13906051
Number of successful extensions: 24802
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24794
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)