Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0832
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   2.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B
          protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 48 FNDSEFSVVQTHPAV 4
          F  SE +V+QTHP++
Sbjct: 54 FFQSEHAVIQTHPSI 68


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A
          protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 48 FNDSEFSVVQTHPAV 4
          F  SE +V+QTHP++
Sbjct: 54 FFQSEHAVIQTHPSI 68


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 216 EMLVHQGQVGWHGGTVDPIG 157
           +M V  G VGW+   V P+G
Sbjct: 275 QMYVDFGSVGWNDWIVAPLG 294


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 196 ALVNKHLEGLSVTSSGCSTPTGRKMRDPMQ 285
           AL+N   +   +TSSG +  + + + DP Q
Sbjct: 370 ALINS--QSCPITSSGSTDSSSQSVEDPQQ 397


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 427 PVPSGFDPVPTRARRTCRPAGCGREPKS 344
           P+    +P PT+   TCR  G   +PK+
Sbjct: 545 PMQQSQNP-PTKPYGTCRSEGIFSDPKN 571


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 541 TDLTMKFNVVDQFGNIVCRI 600
           TD+  +  V    GN++C+I
Sbjct: 102 TDIAWRITVAWYAGNVLCKI 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,300
Number of Sequences: 336
Number of extensions: 3208
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)