Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0832
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical pr... 31 0.48
M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical pr... 31 0.63
AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1 ... 31 0.63
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 31 0.83
Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical po... 30 1.5
Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical po... 30 1.5
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 30 1.5
Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical pr... 30 1.5
Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical pr... 30 1.5
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 30 1.5
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 30 1.5
U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 29 1.9
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 29 1.9
Z77663-4|CAB01213.1| 605|Caenorhabditis elegans Hypothetical pr... 29 2.5
U23455-6|AAC46536.2| 518|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical pr... 28 5.9
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 7.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 7.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 7.7
>M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical
protein ZK370.4b protein.
Length = 1353
Score = 31.5 bits (68), Expect = 0.48
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +1
Query: 82 SPYVYGEQNLSHADHDLLEPLSRDSPDRVNGSSVPTDLALVNKHLEGLSVTSSGCSTPTG 261
S Y++G N + P SR+SP++ VPT L N+ E S TPT
Sbjct: 40 SYYLFGYSNTPSSASSSATPSSRNSPNKERSKKVPTILETDNEDDEIRVNGSPKSGTPTN 99
Query: 262 RKMRDP 279
+ +P
Sbjct: 100 TQTIEP 105
>M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical
protein ZK370.4a protein.
Length = 1342
Score = 31.5 bits (68), Expect = 0.48
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +1
Query: 82 SPYVYGEQNLSHADHDLLEPLSRDSPDRVNGSSVPTDLALVNKHLEGLSVTSSGCSTPTG 261
S Y++G N + P SR+SP++ VPT L N+ E S TPT
Sbjct: 40 SYYLFGYSNTPSSASSSATPSSRNSPNKERSKKVPTILETDNEDDEIRVNGSPKSGTPTN 99
Query: 262 RKMRDP 279
+ +P
Sbjct: 100 TQTIEP 105
>Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical
protein R06C7.3 protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 7 GRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
GR+ G+L+ V G GKF+ NSP+V+
Sbjct: 441 GRIVWAHGKLQTVPGSGKFIPLLANSPFVF 470
>AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1
protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 7 GRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
GR+ G+L+ V G GKF+ NSP+V+
Sbjct: 441 GRIVWAHGKLQTVPGSGKFIPLLANSPFVF 470
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 30.7 bits (66), Expect = 0.83
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 284 RGTCKTPPSLSAKRLKDSTPRLRFASA---TRRAASPPGSGRNRIKPGRNRIKPDRSRTS 454
R + P + +R +D +PR R S TRR+ SPP R P R P R + S
Sbjct: 81 REPIRAPSASPPRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRISRSPVRRSRSPPRRQVS 140
>Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical
polypeptide III protein.
Length = 523
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 1 VNGRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
V G++ +GE+R G FL+ NSPY++
Sbjct: 420 VGGKIAYQNGEVREAPVAGGFLRLSPNSPYLF 451
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 355 RVRNPPGGKSSGLW 396
R RNPPGG+++G W
Sbjct: 510 RPRNPPGGRTTGFW 523
>Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical
polypeptide II protein.
Length = 679
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 1 VNGRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
V G++ +GE+R G FL+ NSPY++
Sbjct: 576 VGGKIAYQNGEVREAPVAGGFLRLSPNSPYLF 607
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 355 RVRNPPGGKSSGLW 396
R RNPPGG+++G W
Sbjct: 666 RPRNPPGGRTTGFW 679
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 1 VNGRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
V G++ +GE+R G FL+ NSPY++
Sbjct: 751 VGGKIAYQNGEVREAPVAGGFLRLSPNSPYLF 782
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 355 RVRNPPGGKSSGLW 396
R RNPPGG+++G W
Sbjct: 841 RPRNPPGGRTTGFW 854
>Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical
protein.
Length = 523
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 1 VNGRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
V G++ +GE+R G FL+ NSPY++
Sbjct: 420 VGGKIAYQNGEVREAPVAGGFLRLSPNSPYLF 451
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 355 RVRNPPGGKSSGLW 396
R RNPPGG+++G W
Sbjct: 510 RPRNPPGGRTTGFW 523
>Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical
protein.
Length = 679
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 1 VNGRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
V G++ +GE+R G FL+ NSPY++
Sbjct: 576 VGGKIAYQNGEVREAPVAGGFLRLSPNSPYLF 607
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 355 RVRNPPGGKSSGLW 396
R RNPPGG+++G W
Sbjct: 666 RPRNPPGGRTTGFW 679
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 1 VNGRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
V G++ +GE+R G FL+ NSPY++
Sbjct: 751 VGGKIAYQNGEVREAPVAGGFLRLSPNSPYLF 782
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 355 RVRNPPGGKSSGLW 396
R RNPPGG+++G W
Sbjct: 841 RPRNPPGGRTTGFW 854
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 1 VNGRVCLDDGELRVVEGLGKFLKTPINSPYVY 96
V G++ +GE+R G FL+ NSPY++
Sbjct: 751 VGGKIAYQNGEVREAPVAGGFLRLSPNSPYLF 782
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 355 RVRNPPGGKSSGLW 396
R RNPPGG+++G W
Sbjct: 841 RPRNPPGGRTTGFW 854
>U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical
protein F59A6.4 protein.
Length = 752
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 317 AKRLKDSTPRLRFASATRRAASPPGSGRNRIKPGRNRI-KPDRSRT 451
+K LK T + R A A +A +P GSGR + N + P +S+T
Sbjct: 11 SKLLKAQTSKKRKAVAASKARTPEGSGRGKKPTTPNGVANPTKSKT 56
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 195 GPGEQASRRSERDVIRL*HPDRTENEGPHAEGLAKLHLLYQQRD*RTRHQDFGSRPQP 368
G E+A +++ RD+ ++ HPDR + + +AK H ++ R + +G+ P
Sbjct: 117 GADEKAIKKAWRDMSKIHHPDR-GGDAQFFDKIAKAHQALTDKEARENWEKYGNPDGP 173
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 195 GPGEQASRRSERDVIRL*HPDRTENEGPHAEGLAKLHLLYQQRD*RTRHQDFGSRPQP 368
G E+A +++ RD+ ++ HPDR + + +AK H ++ R + +G+ P
Sbjct: 117 GADEKAIKKAWRDMSKIHHPDR-GGDAQFFDKIAKAHQALTDKEARENWEKYGNPDGP 173
>Z77663-4|CAB01213.1| 605|Caenorhabditis elegans Hypothetical
protein F53F4.4 protein.
Length = 605
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 181 VPTDLALVNKHLEGLS--VTSSGCSTPTGRKMRDPMQRDLQNSTFSISKETEGLDTKTSV 354
V L++++LE + VT+ G ++ + D +N+T +SKE E + T S
Sbjct: 142 VDASTLLISENLENTTAKVTTDGSKPEVNMLVKTSLNVDDKNTTLGVSKEEEVIATTEST 201
Query: 355 RVRNPPGGK 381
+ + G+
Sbjct: 202 KEKKLKSGE 210
>U23455-6|AAC46536.2| 518|Caenorhabditis elegans Hypothetical
protein F55E10.7 protein.
Length = 518
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 226 SVTSSGCSTPTGRKMRDPMQRDLQNSTFSISKETEGLDTKTSVRVRNPPGGKS 384
SV +G +T T P+ +++Q I +T GLDT++++ ++P GKS
Sbjct: 383 SVFDNGNATSTVNTSLTPIWKNIQQMGSHI--KTAGLDTRSALMKKSPFKGKS 433
>Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical
protein F29C12.5 protein.
Length = 468
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 594 AHNITELINDVEFHSQVGSCYIKYVTKYFVEL 499
AH I ++ V+ S G CYIK +K F E+
Sbjct: 63 AHCIVNVVYSVKLMSSSGVCYIKSDSKLFGEI 94
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 7.7
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +1
Query: 4 NGRVCLDDGELRVVEGLGKFLKTPINSPYVYGEQNLSHADHDLLEPLSRDSPDRVNGSSV 183
NG + D E R V G+ L T ++ +VY + + P+ PD GS +
Sbjct: 3686 NGEIIEKDDEGRPVGPDGQVLSTDVSGNFVYPVTESPNDGEKPIHPVL--GPD---GSPL 3740
Query: 184 PTDLALVNKHLEGLSVTSSGCSTPTGRKMRDPMQRDLQNSTFSISKETE 330
PTD + +G + + P K+ P+ D + +S +T+
Sbjct: 3741 PTDDSGAVIGPDGEVIPTDASGVPLS-KLGLPLPTDSDGNYIILSSDTD 3788
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 7.7
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +1
Query: 4 NGRVCLDDGELRVVEGLGKFLKTPINSPYVYGEQNLSHADHDLLEPLSRDSPDRVNGSSV 183
NG + D E R V G+ L T ++ +VY + + P+ PD GS +
Sbjct: 3731 NGEIIEKDDEGRPVGPDGQVLSTDVSGNFVYPVTESPNDGEKPIHPVL--GPD---GSPL 3785
Query: 184 PTDLALVNKHLEGLSVTSSGCSTPTGRKMRDPMQRDLQNSTFSISKETE 330
PTD + +G + + P K+ P+ D + +S +T+
Sbjct: 3786 PTDDSGAVIGPDGEVIPTDASGVPLS-KLGLPLPTDSDGNYIILSSDTD 3833
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 7.7
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +1
Query: 4 NGRVCLDDGELRVVEGLGKFLKTPINSPYVYGEQNLSHADHDLLEPLSRDSPDRVNGSSV 183
NG + D E R V G+ L T ++ +VY + + P+ PD GS +
Sbjct: 3731 NGEIIEKDDEGRPVGPDGQVLSTDVSGNFVYPVTESPNDGEKPIHPVL--GPD---GSPL 3785
Query: 184 PTDLALVNKHLEGLSVTSSGCSTPTGRKMRDPMQRDLQNSTFSISKETE 330
PTD + +G + + P K+ P+ D + +S +T+
Sbjct: 3786 PTDDSGAVIGPDGEVIPTDASGVPLS-KLGLPLPTDSDGNYIILSSDTD 3833
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,004,842
Number of Sequences: 27780
Number of extensions: 328487
Number of successful extensions: 999
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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