Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0831
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein.      33   0.52 
AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/K...    33   0.52 
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P...    33   0.52 
AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-P...    33   0.52 
AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-P...    33   0.52 
AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-P...    33   0.52 
AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-P...    33   0.52 
AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-P...    33   0.52 
BT024211-1|ABC86273.1|  902|Drosophila melanogaster RE30796p pro...    29   6.4  

>Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein.
          Length = 4151

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 1    RLKKTTRLRSVFRTLLNSIWPHTSEMTFMKGLSRTYLST 117
            + K  TRLR + +T  + +W H+ E    KGL  T+LS+
Sbjct: 1497 KAKLETRLRDL-QTFRSEVWKHSGEFENTKGLGETFLSS 1534


>AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/Kakapo
            long isoform protein.
          Length = 5201

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 1    RLKKTTRLRSVFRTLLNSIWPHTSEMTFMKGLSRTYLST 117
            + K  TRLR + +T  + +W H+ E    KGL  T+LS+
Sbjct: 2543 KAKLETRLRDL-QTFRSEVWKHSGEFENTKGLGETFLSS 2580


>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
            isoform H protein.
          Length = 8805

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 1    RLKKTTRLRSVFRTLLNSIWPHTSEMTFMKGLSRTYLST 117
            + K  TRLR + +T  + +W H+ E    KGL  T+LS+
Sbjct: 6147 KAKLETRLRDL-QTFRSEVWKHSGEFENTKGLGETFLSS 6184


>AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-PC,
            isoform C protein.
          Length = 5160

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 1    RLKKTTRLRSVFRTLLNSIWPHTSEMTFMKGLSRTYLST 117
            + K  TRLR + +T  + +W H+ E    KGL  T+LS+
Sbjct: 2502 KAKLETRLRDL-QTFRSEVWKHSGEFENTKGLGETFLSS 2539


>AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-PA,
            isoform A protein.
          Length = 5501

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 1    RLKKTTRLRSVFRTLLNSIWPHTSEMTFMKGLSRTYLST 117
            + K  TRLR + +T  + +W H+ E    KGL  T+LS+
Sbjct: 2843 KAKLETRLRDL-QTFRSEVWKHSGEFENTKGLGETFLSS 2880


>AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-PE,
            isoform E protein.
          Length = 5201

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 1    RLKKTTRLRSVFRTLLNSIWPHTSEMTFMKGLSRTYLST 117
            + K  TRLR + +T  + +W H+ E    KGL  T+LS+
Sbjct: 2543 KAKLETRLRDL-QTFRSEVWKHSGEFENTKGLGETFLSS 2580


>AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-PB,
            isoform B protein.
          Length = 5390

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 1    RLKKTTRLRSVFRTLLNSIWPHTSEMTFMKGLSRTYLST 117
            + K  TRLR + +T  + +W H+ E    KGL  T+LS+
Sbjct: 2732 KAKLETRLRDL-QTFRSEVWKHSGEFENTKGLGETFLSS 2769


>AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-PG,
            isoform G protein.
          Length = 5385

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 1    RLKKTTRLRSVFRTLLNSIWPHTSEMTFMKGLSRTYLST 117
            + K  TRLR + +T  + +W H+ E    KGL  T+LS+
Sbjct: 2732 KAKLETRLRDL-QTFRSEVWKHSGEFENTKGLGETFLSS 2769


>BT024211-1|ABC86273.1|  902|Drosophila melanogaster RE30796p
           protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 620 FKYLFKFNVFVIFMSSFTLCTIL*TIRNS*F 712
           F +  K+ +F++F S +++ TIL TI +S F
Sbjct: 14  FSFAHKYCIFILFNSVYSILTILATIHDSSF 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,765,788
Number of Sequences: 53049
Number of extensions: 482113
Number of successful extensions: 945
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)