Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0830
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    60   8e-11
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    23   8.5  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 59.7 bits (138), Expect = 8e-11
 Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
 Frame = +2

Query: 254 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIXXXXXXXXXXXXXXXYFKAVRPTL 433
           D GS++   KDKFQ+NLDVQ FSPEEISVK  D  +                 +      
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 434 XXXXXXXXXDCGIAAVIRRG-STITAPRKVPDAVKGERKVPIVQTG---SRSQGDQGPER 601
                    D  ++++   G  TIT PRK  +    ER +PI  TG    +  G   PE 
Sbjct: 63  MLPKGHNEADI-VSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPEN 121

Query: 602 GN 607
           G+
Sbjct: 122 GH 123



 Score = 42.7 bits (96), Expect = 1e-05
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +3

Query: 405 YISRQFVRRYALPEGAAPETVESRLSSDGVLPSPRRGRYPTPSRERERCPLYRPGPVRKE 584
           Y+SR FVRRY LP+G     + S LSSDG+L      +      E    P+   G   K+
Sbjct: 53  YVSRHFVRRYMLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQ 112

Query: 585 I 587
           +
Sbjct: 113 V 113


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 492 VLPSPRRGRYPTPSRERERCP 554
           +LP P RGR     ++R R P
Sbjct: 98  ILPKPMRGRRDPNKQKRPRSP 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,072
Number of Sequences: 2352
Number of extensions: 14870
Number of successful extensions: 125
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)