Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0830
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 40 0.002
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 40 0.002
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 38 0.008
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 37 0.011
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 37 0.015
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 35 0.045
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 35 0.045
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 35 0.045
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 35 0.059
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 35 0.059
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 34 0.078
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 34 0.078
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 34 0.078
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 33 0.14
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 33 0.18
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 33 0.18
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 33 0.18
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 33 0.24
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.24
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.24
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 33 0.24
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 30 1.7
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 30 1.7
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 30 1.7
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 30 1.7
AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine r... 29 2.9
Z66520-10|CAA91391.2| 600|Caenorhabditis elegans Hypothetical p... 29 3.9
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 29 3.9
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 29 3.9
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 29 3.9
U41268-3|AAA82436.1| 270|Caenorhabditis elegans Forkhead transc... 29 3.9
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 29 3.9
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 29 3.9
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68011-1|CAA92012.1| 584|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 27 8.9
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 27 8.9
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 27 8.9
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 27 8.9
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 408 ISRQFVRRYALPEGAAPETVESRLSSDGVL 497
+ R FVR+Y LP G PE ++S LS++GVL
Sbjct: 96 VERHFVRKYNLPTGVRPEQIKSELSNNGVL 125
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 408 ISRQFVRRYALPEGAAPETVESRLSSDGVL 497
+ R FVR+Y LP G PE ++S LS++GVL
Sbjct: 95 VERHFVRKYNLPTGVRPEQIKSELSNNGVL 124
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 248 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVK 343
S ++G I D+ KF V LDV HF PE + +K
Sbjct: 41 SDNIGEQIVNDESKFSVQLDVSHFKPENLKIK 72
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 408 ISRQFVRRYALPEGAAPETVESRLSSDGVLPSPRRGRYPTPSRERER 548
I F RR+ LP+ APE+V+S+L++DG L + P P +E R
Sbjct: 120 IESTFKRRFPLPKAVAPESVQSQLTADGHLTIDAKA--PEPKQEGAR 164
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 248 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVK 343
S ++G I D+ KF V LDV HF PE++ ++
Sbjct: 41 SDNIGEQIVNDESKFSVQLDVSHFKPEDLKIE 72
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 381 KRRKTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVL 497
+ R T ++R+ R Y LPE P TV S L+S GVL
Sbjct: 67 QNRPTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVL 105
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 254 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTAD 352
D+ S++ D +F V++D F PEEI VKT D
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLD 134
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 381 KRRKTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVL 497
+ R T ++R+ R Y LPE P TV S L+S GVL
Sbjct: 67 QNRPTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVL 105
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 387 RKTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVL 497
R T ++R+ R Y LPE P TV S L+S GVL
Sbjct: 66 RPTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVL 102
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 281 KDKFQVNLDVQHFSPEEISVKTA 349
K+KF+V LDVQ F+P+EI VK +
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVS 53
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 408 ISRQFVRRYALPEGAAPETVESRLSSDGVL 497
++R+ R Y LP+ TV+S L++ GVL
Sbjct: 73 VAREINRAYKLPDDVDVSTVKSHLATRGVL 102
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 34.3 bits (75), Expect = 0.078
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 390 KTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVL 497
KT + R++ + + LP G PE + S LS+DGVL
Sbjct: 60 KTPQRTVFREYNQEFLLPRGTNPEQISSTLSTDGVL 95
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 272 KADKDKFQVNLDVQHFSPEEISVKTAD 352
++D ++ DV ++ PEE++VKT D
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTID 48
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 34.3 bits (75), Expect = 0.078
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 390 KTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVL 497
KT + R++ + + LP G PE + S LS+DGVL
Sbjct: 157 KTPQRTVFREYNQEFLLPRGTNPEQISSTLSTDGVL 192
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 272 KADKDKFQVNLDVQHFSPEEISVKTAD 352
++D ++ DV ++ PEE++VKT D
Sbjct: 119 ESDGKTLRLRFDVANYKPEEVTVKTID 145
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.078
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 390 KTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVL 497
KT + R++ + + LP G PE + S LS+DGVL
Sbjct: 171 KTPQRTVFREYNQEFLLPRGTNPEQISSTLSTDGVL 206
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 272 KADKDKFQVNLDVQHFSPEEISVKTAD 352
++D ++ DV ++ PEE++VKT D
Sbjct: 133 ESDGKTLRLRFDVANYKPEEVTVKTID 159
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 248 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVK 343
S ++G + D+ KF V LDV HF PE + +K
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPENLKIK 71
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 544 SLSLDGVGYLPRRGDGRTPSDDSRDSTVSGAAPSGSA 434
S+S +G + R GD DDSR+ST+ A SG A
Sbjct: 1028 SISCEGEAGVSRSGDDHDDLDDSRNSTIVSTASSGGA 1064
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 408 ISRQFVRRYALPEGAAPETVESRLSSDGVL 497
I+R R Y LP+G P T++S+L G+L
Sbjct: 72 ITRSITRCYRLPKGTDPATIKSKLDGSGIL 101
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 278 DKDKFQVNLDVQHFSPEEISVK 343
D+ KF V LDV HF PE + +K
Sbjct: 4 DESKFSVQLDVSHFKPENLKIK 25
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 544 SLSLDGVGYLPRRGDGRTPSDDSRDSTVSGAAPSGSA 434
S+S +G + R GD DDSR+ST+ A SG A
Sbjct: 1028 SISCEGEAGVSRSGDDHDDLDDSRNSTIVSTASSGGA 1064
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 248 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVK 343
S ++G + D+ KF V LDV HF PE++ ++
Sbjct: 33 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE 63
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 248 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVK 343
S ++G + D+ KF V LDV HF PE++ ++
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE 71
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 248 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVK 343
S ++G + D+ KF V LDV HF PE++ ++
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE 71
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 248 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVK 343
S ++G + D+ KF V LDV HF PE++ ++
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE 71
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 263 SSIKADKDKFQVNLDVQHFSPEEISV 340
S I DKF VNL+V +F PEE+ V
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKV 68
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 498 PSPRRGRYPTPSRERERCPLYRPGPVRKEIKDQSEGTQD 614
PSPRR R P+P ++++R YR P R+ + +D
Sbjct: 356 PSPRRRRSPSPKKDKKRD--YRREPARRRRSSDNHRDRD 392
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 498 PSPRRGRYPTPSRERERCPLYRPGPVRKEIKDQSEGTQD 614
PSPRR R P+P ++++R YR P R+ + +D
Sbjct: 356 PSPRRRRSPSPKKDKKRD--YRREPARRRRSSDNHRDRD 392
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 498 PSPRRGRYPTPSRERERCPLYRPGPVRKEIKDQSEGTQD 614
PSPRR R P+P ++++R YR P R+ + +D
Sbjct: 287 PSPRRRRSPSPKKDKKRD--YRREPARRRRSSDNHRDRD 323
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 387 RKTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVL 497
+K S +SR R Y LP+ +T++S L S G+L
Sbjct: 66 KKDSFGDVSRNITRCYKLPKNVDMKTIKSNLDSHGIL 102
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 278 DKDKFQVNLDVQHFSPEEISVK 343
D D F+V L+ +F P+EI VK
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVK 51
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 408 ISRQFVRRYALPEGAAPETVESRLSSDGVL 497
+ R F R+Y++P+ +T+ S L++ GVL
Sbjct: 143 LRRSFSRKYSIPDDVHLDTIRSHLTNSGVL 172
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 290 FQVNLDVQHFSPEEISVKTAD 352
F + +DV HF PEEI V D
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTD 124
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 408 ISRQFVRRYALPEGAAPETVESRLSSDGVL 497
+ R F R+Y++P+ +T+ S L++ GVL
Sbjct: 143 LRRSFSRKYSIPDDVHLDTIRSHLTNSGVL 172
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 290 FQVNLDVQHFSPEEISVKTAD 352
F + +DV HF PEEI V D
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTD 124
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 387 RKTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVL 497
+K S +SR R Y LP+ +T++S L S G+L
Sbjct: 66 KKDSFGDVSRNITRCYKLPKNVDMKTIKSNLDSHGIL 102
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 278 DKDKFQVNLDVQHFSPEEISVK 343
D D F+V L+ +F P+EI VK
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVK 51
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 278 DKDKFQVNLDVQHFSPEE 331
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine
receptor, class t protein7 protein.
Length = 353
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 24 TFLCVLPFLFKYNRRCLFYHSCWVTGPAFVTTTGPVVLLIKISVC 158
+ +CV P LF C F+ PAF +T + I + VC
Sbjct: 165 SLVCVKPVLFSLQYSCWFFDPMTGKDPAFFVSTPDTISNIILIVC 209
>Z66520-10|CAA91391.2| 600|Caenorhabditis elegans Hypothetical
protein F49E12.6 protein.
Length = 600
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 492 VLPSPRRGRYPTPSRERER-CPLYRPGPVRKEIKDQSEGTQD 614
VLP PR R P E P+ RP P ++ D S +QD
Sbjct: 34 VLPEPRVNRTTDPDHENLLPSPVPRPSPAMSQLSDASFLSQD 75
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 474 RLSSDGVLPSPRRGRYPTPSRERER 548
R S ++ SPRR R P+P R+R+R
Sbjct: 479 RRQSSPMVASPRRRRSPSPERQRKR 503
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 221 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGY 358
R + + S S I + KF +NL+V F PE++ + DG+
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKI-NLDGH 71
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 221 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGY 358
R + + S S I + KF +NL+V F PE++ + DG+
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKI-NLDGH 71
>U41268-3|AAA82436.1| 270|Caenorhabditis elegans Forkhead
transcription factor familyprotein 2, isoform a protein.
Length = 270
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = +3
Query: 432 YALPEGAAPETVESRLSSDGVLPSPRRGRYPTPSRERERCPLYRPGPVRKEIKDQSE 602
Y E E ES LS D PS TPS ++ P + IKD E
Sbjct: 55 YLHDESIDDERSESTLSKDSKSPSSSNSEEKTPSSPNDKPPFSYNALIMMAIKDSPE 111
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 221 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGY 358
R + + S S I + KF +NL+V F PE++ + DG+
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKI-NLDGH 71
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 474 RLSSDGVLPSPRRGRYPTPSRERER 548
R S ++ SPRR R P+P R+R+R
Sbjct: 479 RRQSSPMVASPRRRRSPSPERQRKR 503
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 177 CWLPSPVQCSPKTTSDRGDNSRLHLVTSAPA*RPTRTS-SKSIWTCSTSRRKRFR*RLPT 353
C P+ +P T S + S + T+ P+ PT+ S ++S+ + ST+ K LPT
Sbjct: 204 CEGPAQTSTAPSTRSSKLPTSSVWKATTTPSDLPTKPSRTRSLTSTSTTTAK-----LPT 258
Query: 354 GTS 362
TS
Sbjct: 259 TTS 261
>Z68011-1|CAA92012.1| 584|Caenorhabditis elegans Hypothetical
protein T21B6.1 protein.
Length = 584
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +3
Query: 369 KASTKRRKTSTVYISRQFVRRYALPEGAAPETVESRLSSDGVLPSPRRGRYPTPSRERER 548
K S K++ TST Y+S+ LP P+ VE + P R P +
Sbjct: 497 KKSGKKKSTSTEYVSK------GLPV-VFPDEVEENDPTHAGTPMLAREERPPLKVSQHE 549
Query: 549 CPLYRPGP 572
PLY+P P
Sbjct: 550 NPLYKPPP 557
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 138 LIKISVCR*PRTTCWLPSPVQCSPKTTSDRGD 233
+I +++CR W PV+CSP SDR D
Sbjct: 581 IIMLALCRGEFLKIWNGVPVECSP-LVSDRND 611
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 138 LIKISVCR*PRTTCWLPSPVQCSPKTTSDRGD 233
+I +++CR W PV+CSP SDR D
Sbjct: 581 IIMLALCRGEFLKIWNGVPVECSP-LVSDRND 611
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 221 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISV 340
R + + S S I + KF +NL+V F PE++ +
Sbjct: 27 RQFAPVCRISPSESSEIVNNDQKFAINLNVSQFKPEDLKI 66
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 221 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISV 340
R + + S S I + KF +NL+V F PE++ +
Sbjct: 27 RQFAPVCRISPSESSEIVNNDQKFAINLNVSQFKPEDLKI 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,338,578
Number of Sequences: 27780
Number of extensions: 329533
Number of successful extensions: 1116
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -