Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0825
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 291 4e-79
SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 77 1e-14
SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05) 63 2e-10
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_37965| Best HMM Match : TIR (HMM E-Value=3.3) 43 3e-04
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 41 0.001
SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4) 33 0.17
SB_30399| Best HMM Match : ERM (HMM E-Value=0.37) 33 0.29
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 30 1.5
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19) 29 3.6
SB_27444| Best HMM Match : Phage_integrase (HMM E-Value=0.0013) 29 4.7
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0) 28 6.2
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 291 bits (714), Expect = 4e-79
Identities = 139/183 (75%), Positives = 156/183 (85%)
Frame = +1
Query: 1 HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHK 180
+QPKK+ENA ILIANTPMD DKIKVFGS ++VDS AKIA+LE+AEK+KMK+KV I+ H
Sbjct: 224 NQPKKIENAKILIANTPMDADKIKVFGSRVRVDSTAKIADLEMAEKQKMKEKVEMIIKHD 283
Query: 181 CNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHC 360
N FINRQLIYNYPEQLFADAGVMAIEHADFEG+ERL LVTGGEIVSTF PD VKLG C
Sbjct: 284 INCFINRQLIYNYPEQLFADAGVMAIEHADFEGVERLALVTGGEIVSTFGRPDLVKLGTC 343
Query: 361 KLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKV 540
K IEEV+IG++ LI FSG AL ACT+VIRGATQQ++DEAERSLHDALCVL T KE K
Sbjct: 344 KKIEEVMIGEDKLIHFSGCALNEACTVVIRGATQQILDEAERSLHDALCVLNQTGKENKT 403
Query: 541 ICG 549
+ G
Sbjct: 404 VNG 406
>SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 103 bits (246), Expect = 2e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +1
Query: 1 HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHK 180
+QPKK+ENA ILIANTPMD DK+KVFGS ++VDS AKIAELE AEK+KMKDKV I+ H
Sbjct: 8 NQPKKIENAKILIANTPMDADKVKVFGSRVRVDSTAKIAELEKAEKQKMKDKVEMIIKHG 67
Query: 181 CNVFIN 198
N F+N
Sbjct: 68 INCFVN 73
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 77.4 bits (182), Expect = 1e-14
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Frame = +1
Query: 7 PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 186
PK V++A I I P + K K + V ++ +L+ E+EK + + ++ N
Sbjct: 238 PKVVKDAKIAILTCPFEPPKPKT-KHKLDVATVEDYKKLQEYEREKFTEMIKQVKDTGAN 296
Query: 187 VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 366
+ I + + L + A+ IE + + TGG IV F KLG +
Sbjct: 297 LAICQWGFDDEANHLLLQNHLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGKAGI 356
Query: 367 IEEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKV 540
+ E+ G + ++ A TI IRG + ++ EA+RS+HDALCV+ V++ +V
Sbjct: 357 VRELSFGTTKDKMLVIEECHNSRAVTIFIRGGNKMIVGEAKRSIHDALCVVRNLVRDSRV 416
Query: 541 ICG 549
+ G
Sbjct: 417 VYG 419
>SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/102 (30%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = +1
Query: 247 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVAL- 423
++ + + + IE + G + +++ D + L +L+EEV +G +++ +GV+
Sbjct: 3 ILVVRDIERDEIEFICKSIGCKPIASLDHFNPDMLASAELVEEVSVGTSKVVKITGVSNP 62
Query: 424 GSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICG 549
G+ ++++RG+ + V++EA+RSLHDALCV+ VK+ +I G
Sbjct: 63 GNTVSVLVRGSNKLVLEEADRSLHDALCVIRCLVKKRALIAG 104
>SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)
Length = 206
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +1
Query: 280 IERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD--ESLIRFSGVALGSACTIVIRG 453
IE + + TGG IV F KLG ++ E+ G + ++ A TI IRG
Sbjct: 43 IELIAIATGGRIVPRFSELTSEKLGKAGIVRELSFGTTKDKMLVIEECHNSRAVTIFIRG 102
Query: 454 ATQQVIDEAERSLHDALCVLAATVKEPKVICG 549
+ ++ EA+RS+HDALCV+ V++ +V+ G
Sbjct: 103 GNKMIVGEAKRSIHDALCVVRNLVRDSRVVYG 134
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/178 (19%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Frame = +1
Query: 19 ENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFIN 198
++ I + + P+D + + G T+ + + ++ E++ ++ ++ I +V ++
Sbjct: 89 KDCKIAVFSCPLDLMQTETKG-TVLIKNAEELKSFSKGEEDLLEMQIKSIKEKGADVIVS 147
Query: 199 RQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEV 378
+ + +M + + RL + +P LGHC L+
Sbjct: 148 GGKVADMALHFCNKYQIMVVRLTSKWDLRRLCRAISATALPKVTTPTTEDLGHCDLVYLS 207
Query: 379 LIGDESLIRFSGVALGSA-CTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICG 549
IG+ + F +A T+VIRG+T+ ++D+ ER++ D + A ++P+ + G
Sbjct: 208 EIGETPVTIFKQEREETAVATVVIRGSTENIMDDIERAIDDGVNSFKALTRDPRFVPG 265
>SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 406 FSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICG 549
FSG + CTI++RG +Q ++E ERSLHDA+ ++ +K V+ G
Sbjct: 5 FSGCKQSTTCTIIMRGGAEQFMEETERSLHDAIMIVRRAMKNDAVVAG 52
>SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/40 (42%), Positives = 30/40 (75%)
Frame = +1
Query: 430 ACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICG 549
ACTI++RGA++ V++E ER+L DA+ V + +P+++ G
Sbjct: 160 ACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPG 199
>SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/40 (42%), Positives = 30/40 (75%)
Frame = +1
Query: 430 ACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICG 549
ACTI++RGA++ V++E ER+L DA+ V + +P+++ G
Sbjct: 217 ACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPG 256
>SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)
Length = 189
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +1
Query: 427 SACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICG 549
S+ +I++RGA ++DE ERS+HDA+CV+ ++ ++ G
Sbjct: 6 SSSSIILRGANDYMLDEMERSMHDAICVVKRVLESKTLVPG 46
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/133 (19%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Frame = +1
Query: 103 MAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGI 282
+A + L + E+ +K+ V+++ A + NV + + + +++ G+ + I
Sbjct: 625 LASLDPLVLQERNFLKNFVSRVAALRPNVLLVEKTVSRLAQEMLLQHGISLALNVKPAVI 684
Query: 283 ERLGLVTGGEIVSTFDSPDKVKLGHCKLIE----EVLIGD-ESLIRFSGVALGSACTIVI 447
ER+ T E + + + + +LG C+L ++ G+ ++L+ G CT+ +
Sbjct: 685 ERVSRCTKAETLRSMEQLSRPRLGSCQLFRVQNFKLKNGETKTLMYLEGCPTELGCTVTL 744
Query: 448 RGATQQVIDEAER 486
RG V+ + ++
Sbjct: 745 RGGNSFVLTKIKK 757
>SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 35.1 bits (77), Expect = 0.054
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = +1
Query: 223 EQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTF--DSPDKVKLGHCKLIEEVLIGDES 396
++ D V + I + +TG ++STF D P+ G IE +I ++S
Sbjct: 22 KRFLKDRKVYVFDRLSVMHINAVQRLTGATLLSTFTTDIPEHW-YGQLDSIEYTVIANKS 80
Query: 397 LIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICG 549
+ + S CT+++ + ++E + A+ VLA V P V+ G
Sbjct: 81 YLHLIPTQPMTSVCTVILCSPDESSLEELLSTCQSAMSVLAQVVAYPWVVPG 132
>SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4)
Length = 101
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +1
Query: 133 EKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGE 312
E + K+++ KILA NV ++ I + + F + G MA+ ++R+ TG
Sbjct: 2 ESDITKERIQKILASGANVVLSTGGIDDLCLKYFVECGAMAVRRVKKGDLKRIARSTGAT 61
Query: 313 IVSTF------DSPDKVKLGHCKLIEEVLIGDESLI 402
+V + +S D LG + + + I D+ LI
Sbjct: 62 MVLSLANLEGEESFDASMLGQAEEVCQQRICDDELI 97
>SB_30399| Best HMM Match : ERM (HMM E-Value=0.37)
Length = 562
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 64 KIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQ-LIYNYPEQLFAD 240
KI+ F + +VD + + + + E E +VNK++ I R+ L ++P+ + A
Sbjct: 254 KIETFYTQTRVDQLERKIKAKRQENESSAAEVNKLVDQLQRAVIARKPLKADFPKGILAS 313
Query: 241 AGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKL 351
+EH G T G++ + DSP + L
Sbjct: 314 HVKQVLEHHLVNEASGKGGFTTGKVSISVDSPTDLYL 350
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +1
Query: 4 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKC 183
QPK + I + N ++ K + + +++D++ + AE + + DK++K++
Sbjct: 97 QPKTYNHCKIALLNVELEL-KAEKENAEVRLDNVKDYQSIVDAEWDILYDKLDKVVKSGA 155
Query: 184 NVFINRQLIYNYPEQLFAD 240
V +++ I + Q FAD
Sbjct: 156 KVVLSKLPIGDVATQYFAD 174
>SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 28
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 73 VFGSTIKVDSMAKIAELEVAEKEKMKDK 156
VFGS ++VDS AKIA +E +K K K
Sbjct: 1 VFGSRVRVDSTAKIAGVESRKKWKRTPK 28
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -1
Query: 443 TIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPS 273
T++Q P +TP +S+P T ++ + +S S+ +S P P +S PS
Sbjct: 368 TLIQYNPVSTPSNTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPS 424
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -1
Query: 470 ITCCVAPRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTI----SPP 303
+T +A + + +A E S+P+ T+S+ TL+ S VDT SP
Sbjct: 157 VTTSLASAPVVTTSLASAPVETTSLASTPVETTSLASTPVDTTLTASSPVDTTLTASSPV 216
Query: 302 VTKPSLSIPSKSACSIAITPASA 234
T P+ S P K+ +A TP A
Sbjct: 217 ETTPTASPPVKTT-PLAATPVYA 238
>SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19)
Length = 104
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 55 DTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLF 234
+T+KI+ +V +IAEL+V EK++ + N+ L + V Y ++
Sbjct: 26 ETEKIRREYEVFRVSKQTEIAELQVL-NEKLQSE-NRRLRGESKVLQATCQKLRYEREMA 83
Query: 235 ADAGVMAIEH-ADFE-GIERL 291
DAG A++ A FE G+ R+
Sbjct: 84 LDAGDQALQRAATFEKGLNRI 104
>SB_27444| Best HMM Match : Phage_integrase (HMM E-Value=0.0013)
Length = 940
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 450 WCHTTSYRRS*AFTP*CALRACCYCKR 530
+C RS +P CA+ ACC+C R
Sbjct: 300 FCFQKESCRSKEVSPPCAVMACCFCNR 326
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = -1
Query: 428 EPNATPE--KRIKLSS-PIRTSSINLQ*-PSFTLSGESNVDTISPPVTKP--SLSIPSKS 267
+P+ TP K + L++ P T+S L+ PS TLS + PP + P S + +
Sbjct: 1054 QPSVTPASTKSVSLTATPATTTSEVLEPSPSLTLSSSEAASSTLPPTSLPVAQSSTSTST 1113
Query: 266 ACSIAITPASA 234
+ A+TP+S+
Sbjct: 1114 VKTAAVTPSSS 1124
>SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = +1
Query: 49 PMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQ 228
P+ T I+VF I D + KIA+ E+ E K + + H F + + + E
Sbjct: 399 PILTKLIRVFRRQILEDDLDKIAKTEIHEDSKFMEAIELFTHHARAQFQSLVELRHQAEL 458
Query: 229 LFADAGVMAIEHADFEGIERLGLVT 303
FA E + GL++
Sbjct: 459 SFATTLEYFGEETSISSAQFFGLIS 483
>SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0)
Length = 537
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 419 ATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSACSIAITPA 240
A+P + +S SS ++Q S ++ + PP P + P S ++AIT A
Sbjct: 229 ASPSPATQTTSSPTNSSTSVQVQPLETSKDNAKQLMPPPPPPPRATPPPVSIATVAITTA 288
Query: 239 SA 234
+A
Sbjct: 289 AA 290
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,178,450
Number of Sequences: 59808
Number of extensions: 391197
Number of successful extensions: 1261
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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