Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0825
(692 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 293 1e-79
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 97 1e-20
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 89 3e-18
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 87 8e-18
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 76 3e-14
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 76 3e-14
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 68 5e-12
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 67 1e-11
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 60 1e-09
At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kina... 48 8e-06
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 43 2e-04
At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina... 37 0.011
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 37 0.015
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 30 1.3
At5g48300.1 68418.m05966 glucose-1-phosphate adenylyltransferase... 29 2.9
At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein co... 29 2.9
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ... 29 2.9
At3g63150.1 68416.m07092 GTP-binding protein-related low similar... 28 5.1
At1g05800.1 68414.m00606 lipase class 3 family protein similar t... 28 5.1
At1g48150.1 68414.m05374 MADS-box protein (AGL74 ) similar to GB... 28 6.8
At1g29450.1 68414.m03603 auxin-responsive protein, putative simi... 28 6.8
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 293 bits (718), Expect = 1e-79
Identities = 130/186 (69%), Positives = 162/186 (87%)
Frame = +1
Query: 4 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKC 183
QPK++ENANIL+ANT MDTDK+K++G+ ++VDSM K+AE+E AEKEKMKDKV KI+ H
Sbjct: 223 QPKRIENANILVANTAMDTDKVKIYGARVRVDSMTKVAEIEGAEKEKMKDKVKKIIGHGI 282
Query: 184 NVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCK 363
N F+NRQLIYN+PE+LFADAG++AIEHADFEGIERLGLVTGGEI STFD+P+ VKLGHCK
Sbjct: 283 NCFVNRQLIYNFPEELFADAGILAIEHADFEGIERLGLVTGGEIASTFDNPESVKLGHCK 342
Query: 364 LIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVI 543
LIEE++IG++ LI FSG +G AC+IV+RGA+ V+DEAERSLHDALCVL+ TV + +V+
Sbjct: 343 LIEEIMIGEDKLIHFSGCEMGQACSIVLRGASHHVLDEAERSLHDALCVLSQTVNDTRVL 402
Query: 544 CGRRGW 561
G GW
Sbjct: 403 LG-GGW 407
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 96.7 bits (230), Expect = 1e-20
Identities = 57/182 (31%), Positives = 90/182 (49%)
Frame = +1
Query: 4 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKC 183
QPKK N IL+ N ++ K + I++ ++ + AE + DK++K +
Sbjct: 231 QPKKFLNPKILLLNIELELKSEKE-NAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVESGA 289
Query: 184 NVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCK 363
V ++R I + Q FAD + E + R+ GG + ++ ++ LG C+
Sbjct: 290 KVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLNRVAAAAGGTVQTSVNNIIDEVLGTCE 349
Query: 364 LIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVI 543
+ EE +G E FSG G TIV+RG Q I+EAERSLHDA+ ++ VK V+
Sbjct: 350 IFEEKQVGGERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRAVKNSTVV 409
Query: 544 CG 549
G
Sbjct: 410 PG 411
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 89.0 bits (211), Expect = 3e-18
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Frame = +1
Query: 7 PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 186
P +V A I + + K+++ G + V+ ++ ++ E + K+++ K+L N
Sbjct: 229 PLRVSPAKIACLDFNLQKTKMQL-GVQVVVNDPRELEKIRQREADMTKERIEKLLKAGAN 287
Query: 187 VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTF------DSPDKVK 348
V + + I + + F +AG +A+ E + + TG +V+TF ++ D
Sbjct: 288 VILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHVAKATGATLVTTFADMEGEETFDPAH 347
Query: 349 LGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVK 528
LG + E I D+ +I G SA ++++RGA ++DE ER+LHDALC++ T++
Sbjct: 348 LGSADEVVEERIADDDVILIKGTKTSSAVSLILRGANDYMLDEMERALHDALCIVKRTLE 407
Query: 529 EPKVICG 549
V+ G
Sbjct: 408 SNTVVAG 414
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 87.4 bits (207), Expect = 8e-18
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Frame = +1
Query: 7 PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 186
P +VENA I + + K + S + V ++ + E+ + + KI A CN
Sbjct: 236 PTRVENAKIAVIQFQISPPKTDIEQSIV-VSDYTQMDRILKEERNYILGMIKKIKATGCN 294
Query: 187 VF-----INRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKL 351
V I R + + A A +M I+ + + IE + ++ + KL
Sbjct: 295 VLLIQKSILRDAVTDLSLHYLAKAKIMVIKDVERDEIEFVTKTLNCLPIANIEHFRAEKL 354
Query: 352 GHCKLIEEVLIGDESLIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHDALCVLAATVK 528
GH L+EE +GD +++ +G+ +G ++++RG+ Q V+DEAERSLHDALCV+ V
Sbjct: 355 GHADLVEEASLGDGKILKITGIKDMGRTTSVLVRGSNQLVLDEAERSLHDALCVVRCLVS 414
Query: 529 EPKVICG 549
+ +I G
Sbjct: 415 KRFLIAG 421
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 75.8 bits (178), Expect = 3e-14
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Frame = +1
Query: 7 PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 186
PK++E+A+I I P + K K + +D++ K L E++ + V K
Sbjct: 160 PKQIEDAHIAILTCPFEPPKPKT-KHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGAT 218
Query: 187 VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 366
+ I + + L + A+ +E + + TGG IV F KLG +
Sbjct: 219 LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGV 278
Query: 367 IEEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKV 540
+ E G E ++ A A T+ IRG + +I+E +RS+HDALCV ++ +
Sbjct: 279 VREKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSI 338
Query: 541 ICG 549
+ G
Sbjct: 339 VYG 341
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 75.8 bits (178), Expect = 3e-14
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Frame = +1
Query: 7 PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 186
PK++E+A+I I P + K K + +D++ K L E++ + V K
Sbjct: 236 PKQIEDAHIAILTCPFEPPKPKT-KHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGAT 294
Query: 187 VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 366
+ I + + L + A+ +E + + TGG IV F KLG +
Sbjct: 295 LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGV 354
Query: 367 IEEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKV 540
+ E G E ++ A A T+ IRG + +I+E +RS+HDALCV ++ +
Sbjct: 355 VREKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSI 414
Query: 541 ICG 549
+ G
Sbjct: 415 VYG 417
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 68.1 bits (159), Expect = 5e-12
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Frame = +1
Query: 10 KKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHK--- 180
++ EN +IL N ++ +K ++ ++ + A + AE+ + ++V KI+ K
Sbjct: 226 RRAENCHILTCNVSLEYEKSEINAGFFYSNAEQREA-MVTAERRSVDERVKKIIELKKKV 284
Query: 181 CN-----VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKV 345
C V IN++ I L A G++ + A +ERL L GGE V++ D
Sbjct: 285 CGDNDNFVVINQKGIDPPSLDLLAREGIIGLRRAKRRNMERLVLACGGEAVNSVDDLTPE 344
Query: 346 KLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATV 525
LG L+ E ++G+E V ++CTI+I+G I + + ++ D L + T+
Sbjct: 345 SLGWAGLVYEHVLGEEKYTFVEQVKNPNSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTI 404
Query: 526 KEPKVICG 549
++ V+ G
Sbjct: 405 EDECVVLG 412
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 66.9 bits (156), Expect = 1e-11
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 8/188 (4%)
Frame = +1
Query: 10 KKVENANILIANTPMDTDKIKV-----FGSTIKVDSMAKIAELEVAEK-EKMKDKVNKIL 171
++ EN +IL N ++ +K ++ + + + ++M V E+ +K+ + NK+
Sbjct: 226 RRAENCHILTCNVSLEYEKSEINAGFFYSNAEQREAMVTAERRSVDERVQKIIELKNKVC 285
Query: 172 AHKCNVFI--NRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKV 345
A N F+ N++ I L A G++A+ A +ERL L GGE V++ D
Sbjct: 286 AGNDNSFVILNQKGIDPPSLDLLAREGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPD 345
Query: 346 KLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATV 525
LG L+ E ++G+E V +CTI+I+G I + + ++ D L + T+
Sbjct: 346 CLGWAGLVYEHVLGEEKYTFVEQVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTL 405
Query: 526 KEPKVICG 549
++ V+ G
Sbjct: 406 EDECVVLG 413
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 60.1 bits (139), Expect = 1e-09
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Frame = +1
Query: 10 KKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVA---EKEKMKDKVNKILAHK 180
+K+ N I++ + P++ K G + + + EV E+E +++ +IL K
Sbjct: 231 RKIVNPRIILLDCPLEYKK----GENQTNAELVREEDWEVLLKLEEEYIENICVQILKFK 286
Query: 181 CNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGH- 357
++ I + + + F+ AGV AI R+ G IV+ D + +G
Sbjct: 287 PDLVITEKGLSDLACHYFSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDIGTG 346
Query: 358 CKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 537
L E IGD+ ACT+++RG ++ I+E ER+L DA+ V +K PK
Sbjct: 347 AGLFEVKKIGDDFFSFIVDCKEPKACTVLLRGPSKDFINEVERNLQDAMSVARNIIKNPK 406
Query: 538 VICG 549
++ G
Sbjct: 407 LVPG 410
>At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kinase
family protein low similarity to phosphatidylinositol
3,5-kinase [Candida albicans] GI:14571648; contains Pfam
profile PF01504: Phosphatidylinositol-4-phosphate
5-Kinase
Length = 1648
Score = 47.6 bits (108), Expect = 8e-06
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 13/184 (7%)
Frame = +1
Query: 103 MAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGI 282
+A L E E MK + KI + + NV + + +Y +Q + + + + +
Sbjct: 439 LASFNTLLQQENEHMKAIIAKIESLRPNVLLVEKSASSYAQQYLLEKEISLVLNVKRSLL 498
Query: 283 ERLGLVTGGEIVSTFDSPDKVKLGHCKLI--EEVL----IGDES-------LIRFSGVAL 423
+R+ TG + + DS +LGHC+L E VL G++S L+ F G
Sbjct: 499 DRIARCTGAVLCPSLDSISTARLGHCELFRTERVLEQHEAGNQSNRKPSRTLMYFEGCPR 558
Query: 424 GSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICGRRGW*NANGRSSFPRRRY 603
CT+V+RG+ ++ + + + + A+ E + A+ +S P+ R
Sbjct: 559 RLGCTVVLRGSCREELKKVKHVIQYAVFAAYHLSLETSFL--------ADEGASLPKIRL 610
Query: 604 SQPG 615
QPG
Sbjct: 611 KQPG 614
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/181 (18%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Frame = +1
Query: 10 KKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 189
K++E A + + +DT + G T+ + S ++ E+ K+++ + + V
Sbjct: 235 KRMEKAKVAVFAGGVDTTATETKG-TVLIHSAEQLENYAKTEEAKVEELIKAVAESGAKV 293
Query: 190 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 369
++ I +M ++ + + R G P LG+ I
Sbjct: 294 IVSGGSIGEMALHFCERYKIMVLKISSKFELRRFCRTAGAVAHLKLSRPSPEDLGYVDSI 353
Query: 370 EEVLIGDESL-IRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVIC 546
IG ++ I + S T+V+RG+T ++D+ ER++ D + A ++ +++
Sbjct: 354 SVEEIGGVTVTIARNEEGGNSISTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVP 413
Query: 547 G 549
G
Sbjct: 414 G 414
>At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1791
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/117 (19%), Positives = 53/117 (45%)
Frame = +1
Query: 13 KVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVF 192
K+E A +LI ++ ++ + ++ L EK+ +K V KI A + N+
Sbjct: 473 KIEKARLLILGGGLEYQRVS--------NQLSSFDTLLQQEKDHLKMAVAKIHAERPNIL 524
Query: 193 INRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCK 363
+ + + + ++ + + + ++R+ TG +I+ + D KLG+C+
Sbjct: 525 LVEKSVSRFAQEYLLAKDISLVLNIKRPLLDRIARCTGAQIIPSVDHLSSQKLGYCE 581
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1756
Score = 36.7 bits (81), Expect = 0.015
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Frame = +1
Query: 133 EKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGE 312
E + +K V KI +H ++ + + + + ++ + + + +ER+ TG +
Sbjct: 492 EMDHLKMAVAKIDSHNPDILLVEKSVSRFAQEYLLAKDISLVLNIKRSLLERISRCTGAQ 551
Query: 313 IVSTFDSPDKVKLGHCKLIE-----EVLIGD--------ESLIRFSGVALGSACTIVIRG 453
IV + D KLG+C L E + ++L+ F G CTI+++G
Sbjct: 552 IVPSIDQLTSPKLGYCDLFHVEKFVETHVSPCQVAKKMAKTLMFFDGCPKPLGCTILLKG 611
Query: 454 ATQQVIDEAERSLH 495
A + DE ++ H
Sbjct: 612 AHE---DELKKVKH 622
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = -1
Query: 398 KLSSPIRTSSINLQ*PSFTLSGESNVDTISP-----PVTKPSLSIPSKSACSIAITPASA 234
K S+P +S P+F+ S S+ T +P T+ +L +PS S S A+ P +
Sbjct: 471 KTSTPASSSQPQTTSPAFSFSLPSSTSTTAPATSSATTTQTTLVVPSSSGTSTAVAPVAG 530
Query: 233 N 231
+
Sbjct: 531 S 531
>At5g48300.1 68418.m05966 glucose-1-phosphate adenylyltransferase
small subunit 1 (APS1) / ADP-glucose pyrophosphorylase
(ADG1) identical to SP|P55228
Length = 520
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 4 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 144
Q + +A+I +A PMD + FG +K+D +I +E AEK K
Sbjct: 226 QAHRETDADITVAALPMDEQRATAFG-LMKIDEEGRI--IEFAEKPK 269
>At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein
contains similarity to hydantoin utilization protein C
[Pseudomonas sp.] SWISS-PROT:Q01264; contains Pfam
profile PF01546: Peptidase family M20/M25/M40
Length = 525
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 346 KLGHCKL-IEEVLIGDESLIRFSGVALGSACTIVIRGATQ-QVIDEAERSLHDAL 504
+LG K +E + DE +RF LGSA I ++ +V D++ S+ DAL
Sbjct: 198 RLGELKRPVEVIAFSDEEGVRFQSTFLGSAALAGIMPVSRLEVTDKSGISVQDAL 252
>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
similar to BEL1-like homeodomain 1 (GI:13877517)
[Arabidopsis thaliana]; similar to homeodomain protein
GI:7239157 from (Malus domestica); contains weak hit to
Pfam profile PF00046: Homeobox domain
Length = 538
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 79 GSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMA 255
G + DS K EL E+E++++K NK+L V Y+ E L + ++A
Sbjct: 213 GGELSSDSNGKSIELSTIEREELQNKKNKLLTMVDEVDKRYNQYYHQMEALASSFEIVA 271
>At3g63150.1 68416.m07092 GTP-binding protein-related low similarity
to SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
contains Pfam profile PF00036: EF hand (domain)
Length = 643
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 326 NVDTISPPVTKPSLSIPSKSACSIAITPASANN 228
NV + PP+T P+ + P +I TP+S +N
Sbjct: 42 NVPRVLPPITLPADAFPDYIPITIVDTPSSIDN 74
>At1g05800.1 68414.m00606 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 471
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 317 TISPPVTKPSLSIPSKSACSIAITPASA 234
T+SPP++ LS+PS S+ S AI P+ A
Sbjct: 47 TMSPPISSSPLSLPSSSS-SQAIPPSRA 73
>At1g48150.1 68414.m05374 MADS-box protein (AGL74 ) similar to
GB:CAA73304 from [Arabidopsis thaliana] (Gene 215 (1),
11-17 (1998)); contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); PMID: 12837945
Length = 323
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -3
Query: 522 SSSKHAKRIME*TLSFVDNLLCGTTDYDRASRAQRYTR------EADQALITNQNLFDQF 361
SSS ++ ++ FVD LLC T + + R + T+ E DQ+ N ++ D F
Sbjct: 220 SSSDQSRYLVNEDSGFVDGLLCETEEENNGMRLPQETQTQPMFTEEDQSFWENLDVDDVF 279
Query: 360 AVTK 349
+ K
Sbjct: 280 GLFK 283
>At1g29450.1 68414.m03603 auxin-responsive protein, putative similar
to auxin-induced protein 6B (SP:P33083) [Glycine max]
Length = 141
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 283 ERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDES---LIRFSGVALGSACTIVIR- 450
E GL TGG I S FDS L KL++ + D L+ S S C++ ++
Sbjct: 75 EEFGLPTGGPITSPFDSVFLEYL--IKLVQRRMDADTEKALLMSISSARCSSQCSLKLQE 132
Query: 451 GATQQVI 471
+TQQ++
Sbjct: 133 RSTQQLL 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,086,756
Number of Sequences: 28952
Number of extensions: 276580
Number of successful extensions: 866
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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