Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0824
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa s... 36 0.13
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 36 0.13
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 36 0.13
BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix... 36 0.13
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 36 0.13
BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix... 36 0.13
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 36 0.13
BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix... 36 0.13
BC009067-1|AAH09067.1| 465|Homo sapiens SMARCC2 protein protein. 36 0.13
BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein. 36 0.13
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 36 0.13
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 36 0.13
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 36 0.13
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 36 0.13
AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related matrix-... 36 0.13
AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related matrix-... 36 0.13
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 33 0.89
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 33 0.89
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 33 0.89
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 33 0.89
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 33 0.89
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 33 0.89
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 33 0.89
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 32 2.1
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 32 2.1
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 32 2.1
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 2.7
BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein. 31 3.6
BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein. 31 3.6
BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog (Drosop... 31 3.6
BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein. 31 3.6
AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein. 31 3.6
AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog (Drosop... 31 3.6
AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog (Drosop... 31 3.6
AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog (Drosop... 31 3.6
AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog (Drosop... 31 3.6
AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein. 31 3.6
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 31 4.7
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 31 4.7
AC107069-1|AAX93111.1| 538|Homo sapiens unknown protein. 31 4.7
Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein. 30 6.3
AJ315949-1|CAC51389.1| 231|Homo sapiens hypothetical protein pr... 30 6.3
Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate 5-... 30 8.3
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein. 30 8.3
AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation ... 30 8.3
>U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa
subunit protein.
Length = 1213
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 268
P G PQP A+P V PPGP F NQ
Sbjct: 1027 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1054
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 94 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 135
>BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 268
P G PQP A+P V PPGP F NQ
Sbjct: 1058 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1085
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1214
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 268
P G PQP A+P V PPGP F NQ
Sbjct: 1027 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1054
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 268
P G PQP A+P V PPGP F NQ
Sbjct: 1058 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1085
>BC009067-1|AAH09067.1| 465|Homo sapiens SMARCC2 protein protein.
Length = 465
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 268
P G PQP A+P V PPGP F NQ
Sbjct: 278 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 305
>BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 186 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 227
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDS 519
R ++ +RS +R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 268
P G PQP A+P V PPGP F NQ
Sbjct: 1062 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1089
>AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1164
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 268
P G PQP A+P V PPGP F NQ
Sbjct: 1070 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1097
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 528
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 528
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 528
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 528
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 528
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 528
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.89
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 394 RTYAPARSSARQSTAPAAACHARRPSTSARTSHNATRSRRDSGTR 528
R+Y+ +RS +R + + +R S S+++SH+ +RSR SG+R
Sbjct: 108 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 152
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Frame = +2
Query: 194 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 268
TP+PP PNQ PPGP +PT N+
Sbjct: 647 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 676
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Frame = +2
Query: 194 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 268
TP+PP PNQ PPGP +PT N+
Sbjct: 724 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 753
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Frame = +2
Query: 194 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 268
TP+PP PNQ PPGP +PT N+
Sbjct: 724 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 753
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 110 PQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPP 235
P++ P++ S F L+ES + P +P PA+ +SPP
Sbjct: 498 PEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPP 539
>BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 98 AQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 253
AQQ +P T+ +G+ Q+ + SP P P P Q PG IP Q
Sbjct: 382 AQQPGPAKPPTQQVGTPKPL-AQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 432
>BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 98 AQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 253
AQQ +P T+ +G+ Q+ + SP P P P Q PG IP Q
Sbjct: 382 AQQPGPAKPPTQQVGTPKPL-AQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 432
>BC095481-1|AAH95481.1| 591|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 591
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>BC065238-1|AAH65238.1| 527|Homo sapiens ENAH protein protein.
Length = 527
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 304 PPPPPPPPPLPNQVPPPPPPP 324
>AY345143-1|AAR04685.1| 570|Homo sapiens MENA protein.
Length = 570
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>AL591380-2|CAH71476.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 594 PPPPPPPPPLPNQVPPPPPPP 614
>AL356216-3|CAI22019.1| 570|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 570
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 594 PPPPPPPPPLPNQVPPPPPPP 614
>AK096246-1|BAC04736.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ38927 fis, clone NT2NE2012505, highly similar to
Gallus gallus mRNA for avena. ).
Length = 467
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 244 PPPPPPPPPLPNQVPPPPPPP 264
>AF519769-1|AAQ08487.1| 591|Homo sapiens mena protein protein.
Length = 591
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGPIP 247
P P PP +PNQV PP P P
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPP 367
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3
chain protein.
Length = 1670
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGP 241
P G P PP P V PPGP
Sbjct: 181 PQGLPGPPGFPGPVGPPGP 199
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGP 241
P G P PP P V PPGP
Sbjct: 181 PQGLPGPPGFPGPVGPPGP 199
>AC107069-1|AAX93111.1| 538|Homo sapiens unknown protein.
Length = 538
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 185 PVGTPQPPAIPNQVSPPGP 241
P G P PP P V PPGP
Sbjct: 133 PQGLPGPPGFPGPVGPPGP 151
>Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein.
Length = 759
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 98 AQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQT 256
AQQ +P T+ +G+ Q+ + SP P P P Q PP P T
Sbjct: 366 AQQPGPAKPPTQQVGTPKPL-AQQPGLQSPAKAPGPTKTPAQTKPPSQQPGST 417
>AJ315949-1|CAC51389.1| 231|Homo sapiens hypothetical protein
protein.
Length = 231
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 378 PCPCRPYLRTRTVLCPPIYRPRCRLSRTPPLHL--SPYITQCNPLSSR 515
P P L T L PP RP LS PPL L SP ++ C+P SR
Sbjct: 120 PAAPPPALPGPTPLPPPSPRPSPPLSPRPPLLLGCSPTLSLCSPPYSR 167
>Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate
5-phosphatase protein.
Length = 1258
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 191 GTPQPPAIPNQVSPPGPIPTQTFTNQ 268
G P P A P PPGP P TF +
Sbjct: 1087 GPPPPKAHPRPPLPPGPSPASTFLGE 1112
>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
Length = 1149
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 191 GTPQPPAIPNQVSPPGPIPTQTFTNQ 268
G P P A P PPGP P TF +
Sbjct: 1023 GPPPPKAHPRPPLPPGPSPASTFLGE 1048
>AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 3 variant protein.
Length = 1780
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 119 RPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQH 271
+ ITE I S I P TP PP +P+QV P+ T + H
Sbjct: 348 KDITEEIMSGGGSRNPTPPIGRPTSTPTPPQLPSQVPEHSPVVYGTVESAH 398
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,571,661
Number of Sequences: 237096
Number of extensions: 1856414
Number of successful extensions: 12418
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 8231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12229
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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