Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0823
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 444 YMRVLYTLINV*HMYV 491
           Y+RV +T+ NV H Y+
Sbjct: 525 YLRVFFTVFNVVHCYL 540


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 196 NNPIWRLALPSFFLRALTI 252
           +NP+    L +FFL+ALT+
Sbjct: 4   SNPLEAFKLNTFFLKALTV 22


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -1

Query: 167 TIDLLKKCIFCKFIRILFLQI*LEYFTII*YNRGIPCILHSKNIMIL 27
           T+ LL  C F  F   L   + L+YFT+  +   +PCI +  +  I+
Sbjct: 177 TMHLLFCCAFIFFNMHLLFLLCLDYFTL--HLLFLPCIYYFYSAFII 221


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 82  IMVKYSNYICRNRIRINLQK 141
           ++V ++++IC   I IN++K
Sbjct: 25  VLVTFAHFICLFPITINIRK 44


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 214 LALPSFFLRALTILFACAWRFLFHELSGLLFSVFN*ILVILRITLPTMCFY 366
           + L SF      I+F     F  H+ + L    +   L +L + L ++CFY
Sbjct: 288 IILTSFLNNFYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLVSVCFY 338


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 322 ILVILRITLPTMCFYFI 372
           I +I+ +TL ++C++ I
Sbjct: 501 IFIIIPVTLTSVCYFMI 517


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,179
Number of Sequences: 336
Number of extensions: 4380
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)