Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0822
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    28   0.065
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    26   0.35 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   3.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   3.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 28.3 bits (60), Expect = 0.065
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 538 HTGSGLATGPDFGSGNCSVALE 473
           H G+G   GPD G GN SV ++
Sbjct: 309 HAGNGWQWGPDAGLGNLSVCID 330


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +3

Query: 381 NPRTVSKLRPTIRESIPSAEPKLPRS--GSKSVSRATEQFPE 500
           +PRT    +P  ++  P+AE K PR+      ++R   +F E
Sbjct: 208 SPRTRRVKKPGAKQGAPTAEEKRPRTAFSGAQLARLKHEFAE 249


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 173 LNRKRKCKEISSTQHGLHPPTKPTRVSRN 259
           +NR  +  E+   Q   +PPTKP    R+
Sbjct: 534 INRHLRGNELLPMQQSQNPPTKPYGTCRS 562


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 613 NQLQVQTGQYGHNTGQNYQTSQF-NGQSF 696
           + +Q Q  QYG++  QNY ++   NG  +
Sbjct: 53  HHIQQQQLQYGYHNHQNYNSNVLSNGYGY 81


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 613 NQLQVQTGQYGHNTGQNYQTSQF-NGQSF 696
           + +Q Q  QYG++  QNY ++   NG  +
Sbjct: 53  HHIQQQQLQYGYHNHQNYNSNVLSNGYGY 81


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 613 NQLQVQTGQYGHNTGQNYQTSQF-NGQSF 696
           + +Q Q  QYG++  QNY ++   NG  +
Sbjct: 53  HHIQQQQLQYGYHNHQNYNSNVLSNGYGY 81


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 613 NQLQVQTGQYGHNTGQNYQTSQF-NGQSF 696
           + +Q Q  QYG++  QNY ++   NG  +
Sbjct: 53  HHIQQQQLQYGYHNHQNYNSNVLSNGYGY 81


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +3

Query: 372 WVSNPRTVSK 401
           W+ NPRT+++
Sbjct: 464 WIQNPRTITE 473


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 80  HERFSTFRKK*SVGSLTWSKAT 145
           H+R++T+    S G L W   T
Sbjct: 668 HQRYTTYSDVWSFGVLLWEIVT 689


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -3

Query: 269 WNCDCD 252
           W+CDCD
Sbjct: 708 WSCDCD 713


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.131    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,922
Number of Sequences: 336
Number of extensions: 3106
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)