Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0822
(712 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34932| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.38) 31 0.92
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 31 1.2
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 30 2.1
SB_53134| Best HMM Match : PAN (HMM E-Value=0.0002) 30 2.1
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_287| Best HMM Match : Pentapeptide (HMM E-Value=0.1) 29 2.8
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 29 3.7
SB_27609| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_35554| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_59201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_53564| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_41611| Best HMM Match : Hep_Hag (HMM E-Value=2.9e-13) 28 8.6
SB_24036| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_24035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_34932| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.38)
Length = 414
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 610 QNQLQVQTGQYGHNTGQNYQTSQFNGQSFQPGQF 711
Q QL G Q Q QFN FQPGQF
Sbjct: 381 QRQLSAPGGVQDLTQQQQQQQQQFNNSQFQPGQF 414
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 128 TWSKATKTSQ--RKPIKLNRKRKCKEISSTQHGLHPPTKPTRVSRNRSSKAK 277
T +KA K ++ +KP +K K K+ SS + P+ PT SR + KAK
Sbjct: 1897 TTAKALKKAKGKQKPGSATKKTKPKQDSSKKKRKRSPSPPTSASREGTRKAK 1948
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +3
Query: 378 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*L 557
SNP + P+ S PS+EP + S+S + P P S P P S
Sbjct: 505 SNPSSDPSPNPS---SNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSNPSSEPSP 561
Query: 558 CPRAGPISESSP 593
P + P S+ SP
Sbjct: 562 NPSSNPSSDPSP 573
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +3
Query: 417 RESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPISESSP 593
+ S P + P + S + S P P S P P P S P + P S+ SP
Sbjct: 455 KTSNPISNPSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDPSPNPSSNPSSDPSP 513
>SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = -1
Query: 289 CYTDFGLGTAIATDSGRLGWRVEPMLCTADFLALAFAIEFDRLALACFCGFGPCQ*PHRL 110
CYT+ LGTA+ + +E FL I +R A+ + +
Sbjct: 94 CYTE--LGTAVQKSGAEYAYLMEAFGPIPAFLFAWTGIIINRPAITAIVSLIFAEYVAKP 151
Query: 109 FFPECGEPFVVPTALSLC*LV 47
FFPEC P V L L +V
Sbjct: 152 FFPECAPPPAVVKLLGLACIV 172
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 327 PSYS*SNNSKPGQLWWVSNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPK 506
P YS +S Q ++S+P + S +P+ S P +EP+LP +S + T Q
Sbjct: 967 PEYSSPPSSS--QSTFLSSPSSTSLQQPS-PSSQPHSEPRLPSPSLESSTLQTSQLSNDS 1023
Query: 507 SGPVARPEP 533
P+P
Sbjct: 1024 PNSYTAPQP 1032
>SB_53134| Best HMM Match : PAN (HMM E-Value=0.0002)
Length = 648
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 342 SNNSKPGQLWWVSN-PRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPK 506
S + KPGQL + ++ P+T+ +L+ T + S+E K + S +R +P+ K
Sbjct: 563 SRSRKPGQLLFGNDLPKTLQELKTTNKIMNKSSEAKPFKRSSNMTARPGNNYPQNK 618
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +2
Query: 86 RFSTFRKK*SVGSLTWSKATKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPTRVSRNRS 265
+ S ++++ S+ WS K +KP L + +K + + HG + T + + R
Sbjct: 2517 QLSNYKRRWHKSSIAWSSFEKRQLQKPSSLQQSKKKDDPAGGSHGKNRSTSFSGEKKKRP 2576
Query: 266 SKAK 277
A+
Sbjct: 2577 KSAQ 2580
>SB_287| Best HMM Match : Pentapeptide (HMM E-Value=0.1)
Length = 288
Score = 29.5 bits (63), Expect = 2.8
Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Frame = +2
Query: 125 LTWSKATKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPTRVSRNRSSKAKISITIML-- 298
+T ++ T+T+ ++ R R + + H TRV RNR ++ ++ T +
Sbjct: 78 VTRTRVTRTNVTCT-RVTRTRVTRTYLTRSHVTRTQVTRTRVFRNRVTRTNVTRTRVTRT 136
Query: 299 -----IILLCPLERTQLQLVQQFQTRAAMVGLKPKDSFKTSPNNQGINSKR--RTKITTV 457
+ RTQ+ + F+ R + +T + R RT+ T
Sbjct: 137 RVTRTYLTRNHFPRTQVTRTRVFRNRVTRTNVTRTRFTRTRVTRTRVTRTRFTRTRFTRT 196
Query: 458 RLKISFKGNRTISRTKIRSSCKARTSME*TNLTMSK 565
R+ + ++RT++ + RT + T+LT ++
Sbjct: 197 RVTRTHLTRTRVTRTRVTRTHLTRTRVTRTHLTRTR 232
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 140 ATKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPTRVSRNRSSK 271
A +T RKP+ L R +E+ H + PTR+ + +S+
Sbjct: 175 AIQTPPRKPVNLTRSGSSEELLEKSTTSHKTSSPTRMFKRATSE 218
>SB_27609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 149 FLWLWTMSMTPPIIFSGMWRTFRGSNSAVVVLISTTKSMTSEKDS 15
FL++ S T PI++S +TFR + ++ + ST +S +S S
Sbjct: 634 FLFVLVNSCTNPILYSWRLKTFRNALKKLLGIKSTRQSSSSSTSS 678
>SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 417 RESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWS 542
R +P+A P +P G ++ + + FP P +P+P S
Sbjct: 215 RPVVPTARP-IPNGGEETTTATNQAFPRLPPPPAKKPKPAVS 255
>SB_35554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 381 NPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARP-EPVWSEPT*L 557
NPR VS R ES P + P+ R K ++ E+FP P+ VAR S
Sbjct: 287 NPRKVSGTR----ESCPKSHPRSFRDPRKLPEKSPEKFPGPEK--VARKVTREVSGTRES 340
Query: 558 CPRAGPISESSP 593
CP++ P S P
Sbjct: 341 CPKSHPRSFRDP 352
>SB_59201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1326
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = -1
Query: 595 IGLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGNCSVALETDFEPDRGNFGSALGIDSL 416
+G+D+++ + + VG G+ T G V ++TD G +G+D+L
Sbjct: 1221 VGVDTDVVTGVDNLVVGVETLVVGVDTDVVTGVDTLVVGVDTDVVT--GVDTLVVGVDTL 1278
Query: 415 IVGRSFETVLGFET 374
+VG + V+G ET
Sbjct: 1279 VVGVDTDVVVGVET 1292
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 423 SIPSAEPKLPRSGSKSVSRATEQFPEPKS--GPVARPEPVWSEPT*LCPRAGPISES 587
S+ P+LPR + S ++ P PK PV RP V + P + PRA ES
Sbjct: 202 SVEPGLPQLPRPRTNSSNKKKSAPPLPKHVVSPVKRPNKVKAPPP-IPPRASESIES 257
>SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 324 VPSYS*SNNSKPGQLWWVSNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE- 500
VP + SN G L + + + +R +RE + AE + P SGS S T P
Sbjct: 541 VPPTTPSNTPIQG-LESIEDNMNLEAIRNALREDLTPAEGRPPSSGSSGRSTPTRWHPRT 599
Query: 501 PKSG 512
P SG
Sbjct: 600 PGSG 603
>SB_53564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +2
Query: 152 SQRKPIKLNRKR-------KCKEISSTQHGLHPPTKPTRVSRNRSSKAKISITIMLIILL 310
S++KP+K + R ++ S + GL+ KP + ++R + A I++ I L ++L
Sbjct: 159 SRKKPVKSGKSRISSIQYTHSRQRSQSSCGLYKSVKPVQSGKSRFASAMIALPIKLQVVL 218
>SB_41611| Best HMM Match : Hep_Hag (HMM E-Value=2.9e-13)
Length = 422
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 595 IGLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGNCSVALETDFEPDRGNFGSALGIDSL 416
+G+D+++ + VG G+ T G V ++TD F +G+D+L
Sbjct: 107 VGVDTDVVTGVETLVVGVETLVVGVDTDVVTGVDTLVVGVDTDVVTGVDTF--VVGVDTL 164
Query: 415 IVGRSFETVLGFET 374
+VG + V G ET
Sbjct: 165 VVGVDTDVVTGVET 178
>SB_24036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 595 IGLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGNCSVALETDFEPDRGNFGSALGIDSL 416
+G+D+++ + VG G+ T G V ++TD F +G+D+L
Sbjct: 765 VGVDTDVVTGVETLVVGVETLVVGVDTDVVTGVDTLVVGVDTDVVTGVDTF--VVGVDTL 822
Query: 415 IVGRSFETVLGFET 374
+VG + V G ET
Sbjct: 823 VVGVDTDVVTGVET 836
>SB_24035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 902
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 595 IGLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGNCSVALETDFEPDRGNFGSALGIDSL 416
+G+D+++ + VG G+ T G V ++TD F +G+D+L
Sbjct: 572 VGVDTDVVTGVETLVVGVETLVVGVDTDVVTGVDTLVVGVDTDVVTGVDTF--VVGVDTL 629
Query: 415 IVGRSFETVLGFET 374
+VG + V G ET
Sbjct: 630 VVGVDTDVVTGVET 643
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.131 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,852,785
Number of Sequences: 59808
Number of extensions: 421308
Number of successful extensions: 1301
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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