Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0819
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   4.9  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   8.6  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.6  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -2

Query: 145 CLEEFCDCQWNTKSIIRFSDLPIIVQIDYIAGFDNNS 35
           C++E    + + +  + FS+LP+ +   Y A  ++NS
Sbjct: 517 CVDEVLKHELSLEGSLDFSNLPLSIHNSYAAPNNSNS 553


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 288 GNLCIWTKKC 259
           G  CIW KKC
Sbjct: 84  GGSCIWAKKC 93


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 263 FFVQMHRLPPLIIDDSYYM 319
           FF  M  LPP+I+D  Y+M
Sbjct: 306 FFFYM--LPPIILDAGYFM 322


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,909
Number of Sequences: 2352
Number of extensions: 10949
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)