BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0817 (587 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.9 AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 21 6.8 >DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine receptor alpha9subunit protein. Length = 431 Score = 22.6 bits (46), Expect = 2.9 Identities = 9/23 (39%), Positives = 11/23 (47%) Frame = +2 Query: 8 VCFISCRGC*AWNLPDASRDVPN 76 +C I C W LP S + PN Sbjct: 292 ICHILCMSDLHWQLPHNSTNPPN 314 >AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. Length = 57 Score = 21.4 bits (43), Expect = 6.8 Identities = 10/37 (27%), Positives = 15/37 (40%) Frame = +2 Query: 455 YLHNTLRADRADRIDCITSRRNSSDQEXVCTRSGHNL 565 + N RADR R+ C + C + H+L Sbjct: 6 HFENEERADRHRRVTCDLLSFKGQVNDSACAANCHSL 42 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 144,422 Number of Sequences: 438 Number of extensions: 2710 Number of successful extensions: 8 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17115420 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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