Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0813
         (809 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.001
UniRef50_A2G610 Cluster: Ankyrin repeat protein, putative; n=1; ...    33   6.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -3

Query: 696 FLML*WVDELTAYLVLSGYWSP 631
           FL+L WVDELTA+LVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A2G610 Cluster: Ankyrin repeat protein, putative; n=1;
           Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
           putative - Trichomonas vaginalis G3
          Length = 710

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = +2

Query: 563 AAILEALKLISQGGWRIYIIDIYGLQ*PLNTR*AVSSSTHQSIKNKIKNPLSTLVN 730
           A  ++ +KL+ + G  + IIDI   + P  T  A++S + QSI+  ++N  + LVN
Sbjct: 434 ADAIDCVKLLIESGADVNIIDIQNRETPFMT--AINSQSEQSIRELLQNADADLVN 487


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,767,766
Number of Sequences: 1657284
Number of extensions: 11980171
Number of successful extensions: 22028
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22024
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)