Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0813
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.8  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 588 SFKASSIAAAPPFK 547
           SFKAS +  APP K
Sbjct: 32  SFKASKVGPAPPIK 45


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 349 VHSAIRYSAYVIRYVPPLNH 408
           +H  IRYSA+ + +V  L H
Sbjct: 140 LHKKIRYSAFGMIFVALLEH 159


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 661 LPGVKWLLEPIDIYNVNAPPTLRYK 587
           +PG  WL  P  + N   P +LR+K
Sbjct: 4   VPG--WLTPPHSLGNTVTPVSLRFK 26


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 122 WFKNRILIEISRVKKQKTI 66
           WF+NR   E  +VKK++ +
Sbjct: 203 WFQNRRAKERKQVKKREEV 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,912
Number of Sequences: 336
Number of extensions: 3199
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)