Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0806
         (632 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0348 - 3076395-3078236                                           31   1.0  
01_06_1560 + 38251268-38251471,38251567-38251672,38251992-382522...    29   3.1  
10_07_0019 + 11931519-11932310                                         28   5.4  
08_01_0053 + 365188-365376,365451-365729,365818-367341                 28   5.4  
03_03_0101 - 14431327-14432390,14432599-14432731                       28   7.1  
01_07_0242 + 42234217-42234320,42234708-42235029,42235377-422357...    28   7.1  
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811...    27   9.4  
07_03_0976 + 23061633-23061686,23062783-23063564,23065468-230657...    27   9.4  

>08_01_0348 - 3076395-3078236
          Length = 613

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = -2

Query: 205 ITSWSFTMGKLSSTKRVQVSRKN--SLPLQLTI--NFMVSGFTLRISLKRVSFWFLPGPK 38
           + SW+  +  LS +  V+ ++    ++P++ ++  N MVSGF     +     WF   P+
Sbjct: 111 VVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPE 170

Query: 37  KGSS 26
           KG +
Sbjct: 171 KGDA 174


>01_06_1560 +
           38251268-38251471,38251567-38251672,38251992-38252203,
           38252306-38252512,38253327-38254694
          Length = 698

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +3

Query: 426 SFESFVNRVI---WENFYKPIVYIGTDSAEEEEILIE 527
           S ES + +VI   W++ + P VY+  D    EEILIE
Sbjct: 167 SKESAIQQVIACIWKHPHAPFVYLACDLLGHEEILIE 203


>10_07_0019 + 11931519-11932310
          Length = 263

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 489 RCKRWVCRSSPI*RG 445
           RC+RW CRS P  RG
Sbjct: 39  RCRRWWCRSEPTSRG 53


>08_01_0053 + 365188-365376,365451-365729,365818-367341
          Length = 663

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 423 NSFESFVNRVIWENFYKPIVYIGTDSAEEEEILIE 527
           +S    +N  IW++   P+VY+ +D   +EEIL+E
Sbjct: 152 DSIRQVIN-CIWKHPNAPVVYLVSDMLGQEEILME 185


>03_03_0101 - 14431327-14432390,14432599-14432731
          Length = 398

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 447 RVIWENFYKPIVYIGTDSAEEEEILIE 527
           R+ W N+ +P +  GT S EEE+++I+
Sbjct: 54  RLRWINYLRPDLKRGTFSQEEEDLIIQ 80


>01_07_0242 +
           42234217-42234320,42234708-42235029,42235377-42235778,
           42235921-42236265,42236785-42236854,42237098-42237173,
           42237309-42237459
          Length = 489

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 306 HEVIRIV-EPSYVGMNNEYRISLAKKGGGCPIMNIHSE 416
           HE ++++ +P   G   EY   +A+  GG PI  I ++
Sbjct: 213 HETVKVICKPCKPGQIQEYASEIARLSGGIPINTIGND 250


>10_01_0007 -
           79867-79950,80258-80303,80409-80641,80765-80836,
           81135-81230,81506-81607,81684-82349
          Length = 432

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 236 GFEVGDEVHVHHLLVVYN 183
           GF  GD + VHH+LV  N
Sbjct: 159 GFRTGDTIAVHHILVFLN 176


>07_03_0976 +
           23061633-23061686,23062783-23063564,23065468-23065717,
           23065808-23065984
          Length = 420

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 453 IWENFYKPIVYIGTDSAEEEEILIEGFFSFS 545
           I E    P++Y+ TD+AE E  L++    F+
Sbjct: 300 IVEKANAPVIYLSTDAAESETSLLQSLVVFN 330


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,253,801
Number of Sequences: 37544
Number of extensions: 427211
Number of successful extensions: 1164
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)