Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0804
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.2  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 393 LGRLQGYSLELRRHDKGVLLRSERANLCLYR 301
           LG L+  + EL  H +GVL  ++  N+C  R
Sbjct: 11  LGHLRFKAPELPEHWEGVLDATKPGNVCYQR 41


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +1

Query: 97  FILY--INDMLSIDGMHWYADDSTGDARYIGHQSLSRSAVQERRSKLVSEVENSLGRVSE 270
           F+ Y  I DML  +G H   D+S       G Q +     +    K+    E +LG V  
Sbjct: 453 FLAYFEICDMLLNEGWHKGMDESGSPYMVYGDQWVGYDDSESVEKKVNYVQEMNLGGVFI 512

Query: 271 W 273
           W
Sbjct: 513 W 513


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 49  TINAGVPQGSVLSP 90
           T + G+PQG VL+P
Sbjct: 442 TYDYGIPQGVVLNP 455


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 49  TINAGVPQGSVLSP 90
           T + G+PQG VL+P
Sbjct: 442 TYDYGIPQGVVLNP 455


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 89  PRFSSCISMTCCLLMACIGM 148
           P +    SM  C+++ C+G+
Sbjct: 64  PNYIRTTSMVFCIIIMCLGV 83


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 89  PRFSSCISMTCCLLMACIGM 148
           P +    SM  C+++ C+G+
Sbjct: 64  PNYIRTTSMVFCIIIMCLGV 83


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 12/43 (27%), Positives = 17/43 (39%)
 Frame = +3

Query: 471 VLNAGSPQQSKAVLHAWTKTFAL*STSPASRGVLLPSLGRGSQ 599
           +     PQ+    L  + KTF L S S A  G  +   G   +
Sbjct: 247 IQRGADPQKIALGLPVYGKTFTLSSASNAKLGAPVKGAGNSGK 289


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 308 RHKFARSLRRRTPLSWRRN 364
           ++++ +  R R  L+WRRN
Sbjct: 583 QNQWCKPCRPREQLTWRRN 601


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 308 RHKFARSLRRRTPLSWRRN 364
           ++++ +  R R  L+WRRN
Sbjct: 475 QNQWCKPCRPREQLTWRRN 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,267
Number of Sequences: 336
Number of extensions: 3719
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)