Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0803
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 316 DDVNYRCYWCSVAYYHYCV 372
           D + ++CY     YY YCV
Sbjct: 44  DSLVFKCYNLRRIYYFYCV 62


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/58 (22%), Positives = 25/58 (43%)
 Frame = -3

Query: 205 VSFQNFLDIDTHNANNFIYFGLCLCQAFVAYSWCGTSSLFFHFYCILCTVFIKYQCEC 32
           ++ +NF     H     +   L L Q  +  S+ GT++    FY ++  +  +   EC
Sbjct: 29  IALKNFRLCKKHKTKKPVQI-LALLQEIIPKSYFGTTTNLKRFYKVVEKILTQSSFEC 85


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 376 CPHNNDNKQHCTNSTYN 326
           C + ++ K H + +TYN
Sbjct: 336 CKNEDETKNHYSKNTYN 352


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 376 CPHNNDNKQHCTNSTYN 326
           C + ++ K H + +TYN
Sbjct: 228 CKNEDETKNHYSKNTYN 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,943
Number of Sequences: 336
Number of extensions: 3594
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)