Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0803
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin... 128 3e-30
AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein. 128 3e-30
AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein. 128 3e-30
Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical pr... 91 1e-18
AF239889-1|AAF45301.1| 118|Caenorhabditis elegans synaptobrevin... 91 1e-18
AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical... 58 5e-09
Z83246-5|CAE18062.1| 102|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z77666-14|CAE17894.1| 102|Caenorhabditis elegans Hypothetical p... 50 2e-06
L10990-1|AAB59178.1| 102|Caenorhabditis elegans Synaptobrevin r... 50 2e-06
Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81123-3|CAB03366.1| 102|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z93380-5|CAB07601.1| 240|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 31 1.1
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 30 2.0
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 30 2.0
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 29 2.6
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 29 2.6
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 29 3.5
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 4.6
U41990-3|AAY44010.1| 291|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical pr... 23 9.7
>AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin
related protein 1 protein.
Length = 109
Score = 128 bits (310), Expect = 3e-30
Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Frame = +2
Query: 89 QGGSSA-PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 265
QGGS PR S+KRL QTQA+VDEVVGIM+VNVEKVLERDQKLS+LD+RADALQ GA+QF
Sbjct: 10 QGGSQGGPRPSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQF 69
Query: 266 EQQAGKLKRKYWWQNLKMML 325
E+ A LKRKYWW+N+KMM+
Sbjct: 70 EKSAATLKRKYWWKNIKMMI 89
>AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 128 bits (310), Expect = 3e-30
Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Frame = +2
Query: 89 QGGSSA-PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 265
QGGS PR S+KRL QTQA+VDEVVGIM+VNVEKVLERDQKLS+LD+RADALQ GA+QF
Sbjct: 10 QGGSQGGPRPSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQF 69
Query: 266 EQQAGKLKRKYWWQNLKMML 325
E+ A LKRKYWW+N+KMM+
Sbjct: 70 EKSAATLKRKYWWKNIKMMI 89
>AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 128 bits (310), Expect = 3e-30
Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Frame = +2
Query: 89 QGGSSA-PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 265
QGGS PR S+KRL QTQA+VDEVVGIM+VNVEKVLERDQKLS+LD+RADALQ GA+QF
Sbjct: 10 QGGSQGGPRPSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQF 69
Query: 266 EQQAGKLKRKYWWQNLKMML 325
E+ A LKRKYWW+N+KMM+
Sbjct: 70 EKSAATLKRKYWWKNIKMMI 89
>Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical
protein F23H12.1 protein.
Length = 118
Score = 90.6 bits (215), Expect = 1e-18
Identities = 37/68 (54%), Positives = 56/68 (82%)
Frame = +2
Query: 122 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 301
KR+ QA+V+EV+ +MR NV KV+ERD +L+ LD+RA+ LQ+GA+QF+Q + L++KYW
Sbjct: 32 KRMQMAQAQVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYW 91
Query: 302 WQNLKMML 325
WQN++MM+
Sbjct: 92 WQNIRMMI 99
>AF239889-1|AAF45301.1| 118|Caenorhabditis elegans
synaptobrevin-like protein protein.
Length = 118
Score = 90.6 bits (215), Expect = 1e-18
Identities = 37/68 (54%), Positives = 56/68 (82%)
Frame = +2
Query: 122 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 301
KR+ QA+V+EV+ +MR NV KV+ERD +L+ LD+RA+ LQ+GA+QF+Q + L++KYW
Sbjct: 32 KRMQMAQAQVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYW 91
Query: 302 WQNLKMML 325
WQN++MM+
Sbjct: 92 WQNIRMMI 99
>AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical
protein Y69A2AR.6 protein.
Length = 245
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/84 (30%), Positives = 50/84 (59%)
Frame = +2
Query: 74 IKMEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHG 253
+K +Q + P +R+ + +VD+V +M NVE+++ER ++L ++NR +AL+
Sbjct: 138 LKFIKQHNETFPTAQQQRMIDIRRQVDDVRQVMADNVERIMERGERLENMENRTEALRTS 197
Query: 254 AAQFEQQAGKLKRKYWWQNLKMML 325
A F+ A +++R + +NLK L
Sbjct: 198 ATSFKSTARRVQRHFCQKNLKWTL 221
>Z83246-5|CAE18062.1| 102|Caenorhabditis elegans Hypothetical
protein ZK795.4 protein.
Length = 102
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/63 (34%), Positives = 41/63 (65%)
Frame = +2
Query: 119 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 298
D+++ +T+ ++D V IM+ NV+K++ER KL +L RA L+ + + + A K+KR+
Sbjct: 15 DQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKREM 74
Query: 299 WWQ 307
W+
Sbjct: 75 SWK 77
>Z77666-14|CAE17894.1| 102|Caenorhabditis elegans Hypothetical
protein ZK795.4 protein.
Length = 102
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/63 (34%), Positives = 41/63 (65%)
Frame = +2
Query: 119 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 298
D+++ +T+ ++D V IM+ NV+K++ER KL +L RA L+ + + + A K+KR+
Sbjct: 15 DQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKREM 74
Query: 299 WWQ 307
W+
Sbjct: 75 SWK 77
>L10990-1|AAB59178.1| 102|Caenorhabditis elegans Synaptobrevin
related protein 5 protein.
Length = 102
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/63 (34%), Positives = 41/63 (65%)
Frame = +2
Query: 119 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 298
D+++ +T+ ++D V IM+ NV+K++ER KL +L RA L+ + + + A K+KR+
Sbjct: 15 DQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKREM 74
Query: 299 WWQ 307
W+
Sbjct: 75 SWK 77
>Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical
protein B0513.9a protein.
Length = 116
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +2
Query: 80 MEEQGGSSAPRVSDKRLAQTQA---KVDEVVGIMRVNVEKVLERDQKLSELDNRADALQH 250
M + S+ P +D++ + Q +VD V +M NVE++LER ++L ++ R++ L
Sbjct: 2 MSMENDSNKPSDNDQQKEKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNA 61
Query: 251 GAAQFEQQAGKLKRKYWWQNLK 316
+A F+ A K++RK+ N K
Sbjct: 62 TSANFKFTARKVQRKFCMLNAK 83
>Z81123-3|CAB03366.1| 102|Caenorhabditis elegans Hypothetical
protein T14D7.3 protein.
Length = 102
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/63 (33%), Positives = 41/63 (65%)
Frame = +2
Query: 119 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 298
D+++ +T+ +++ V IM+ NV+K++ER KL +L RA L+ + + + A K+KR+
Sbjct: 15 DQKIMRTRQELNSVKIIMKENVQKIMERQGKLDDLVERAQKLEEASDVYVKCAVKIKREM 74
Query: 299 WWQ 307
W+
Sbjct: 75 SWK 77
>Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical
protein B0513.9b protein.
Length = 113
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/65 (32%), Positives = 40/65 (61%)
Frame = +2
Query: 122 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 301
+++ + +VD V +M NVE++LER ++L ++ R++ L +A F+ A K++RK+
Sbjct: 16 EKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQRKFC 75
Query: 302 WQNLK 316
N K
Sbjct: 76 MLNAK 80
>U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical
protein F55A4.1 protein.
Length = 214
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 146 KVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 295
++ +V IM N+E V+ R + L+ L+NRA L + ++ A L R+
Sbjct: 140 ELQDVTRIMVTNIEDVIHRGEALNILENRASELSGMSKKYRDDAKALNRR 189
>Z93380-5|CAB07601.1| 240|Caenorhabditis elegans Hypothetical
protein F28C12.6 protein.
Length = 240
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/86 (19%), Positives = 40/86 (46%)
Frame = +2
Query: 23 NRVTFTLIFNKNSA*YTIKMEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLER 202
++ T + FN+ + + A + S+K + A++ ++ +R +EK+
Sbjct: 65 HQATSRVNFNQRTVTINPHDDTDDADQAEKSSEKEVYDEIAEIADITNSIRAAIEKIRNY 124
Query: 203 DQKLSELDNRADALQHGAAQFEQQAG 280
DQ+ +L R + G A ++++ G
Sbjct: 125 DQQWKDLFTRIPTEREGMADYKKRLG 150
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 77 KMEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGA 256
K+ E +A VS + ++T A V ++ M+ NV+ V K SE N++DA+ H A
Sbjct: 499 KLLESVQQTAKSVS--QFSETLASVKKIPDAMKKNVKNVTLELNKRSESLNQSDAISHSA 556
Query: 257 AQFEQQAGKLK 289
+ G +K
Sbjct: 557 SALRSVFGLVK 567
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/60 (21%), Positives = 33/60 (55%)
Frame = +2
Query: 110 RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 289
++ D++L + +AK+ + + +V +LE+D++L + + + F+Q+ +LK
Sbjct: 100 KILDEKLDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERSAFDQELTRLK 159
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 152 DEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAA-QFEQQAGKLKR 292
DE + + E +E DQKL E++ ADA QF Q + LK+
Sbjct: 676 DENFSVQSICSETFVETDQKLMEVETGADAFTESITDQFAQMSEGLKK 723
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/60 (21%), Positives = 32/60 (53%)
Frame = +2
Query: 110 RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 289
++ D+ L + +AK+ + + +V +LE+D++L + + + F+Q+ +LK
Sbjct: 100 KILDEELDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERSAFDQELTRLK 159
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 29.5 bits (63), Expect = 2.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 325 NYRCYWCSVAYYHYCVGNV 381
+YRC WC + C+GN+
Sbjct: 182 DYRCIWCGCCVHDTCIGNL 200
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 29.5 bits (63), Expect = 2.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 325 NYRCYWCSVAYYHYCVGNV 381
+YRC WC + C+GN+
Sbjct: 182 DYRCIWCGCCVHDTCIGNL 200
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 289
+ + T A ++++ M+ NV+ V K S+ N++DA+ H A+ G L+
Sbjct: 712 QFSATLASIEKIPDTMKKNVKNVTLELNKWSQSLNQSDAITHSASALRGVFGLLE 766
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 322 VNYRC-YWCSVAYYHYCVGNVRFVIPC 399
+ Y+C + CS+A Y +C G F PC
Sbjct: 3683 LEYKCRFCCSIAVY-FCFGTTHFCAPC 3708
>U41990-3|AAY44010.1| 291|Caenorhabditis elegans Hypothetical
protein F52B10.2 protein.
Length = 291
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 376 CPHNNDNKQHCTNSTYN*HHLQILPPIL 293
C N D K HC T HH + P +L
Sbjct: 240 CIKNEDGKLHCLGKTKGRHHPDVEPSVL 267
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 86 EQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKL----SELDNRADALQHG 253
++G + K + + +A + + M ++EKVLE +QKL +ELD +++ +
Sbjct: 26 KKGLEGQSNLISKLMKKHEANIPFIEDTMATDIEKVLETNQKLQLAFAELDEQSEKINSL 85
Query: 254 AAQFEQQAGKLKR 292
Q + +L +
Sbjct: 86 ETQQHKLVAELSK 98
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 301 VAEFEDDVNYRCYWCSVAYYHYCVGNVRFVIP 396
+AE+ DD N++ + SV + +GN+RF P
Sbjct: 31 MAEWSDDANHKFTFKSVPFAKPPIGNLRFAPP 62
>Z92782-8|CAB07185.1| 197|Caenorhabditis elegans Hypothetical
protein F14F8.9 protein.
Length = 197
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 183 SRKFWKETKNCRN*IIAQMR 242
S K W+ TK+C N I Q+R
Sbjct: 67 SEKNWRLTKSCENYINFQVR 86
Score = 22.6 bits (46), Expect(2) = 9.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 21 LIELHSH*YLIKTVHNIQ*KWKNKE 95
LIE YLI+T HN++ ++K+++
Sbjct: 45 LIEDRCDRYLIETFHNMRNRFKSEK 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,296,025
Number of Sequences: 27780
Number of extensions: 307043
Number of successful extensions: 902
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -