Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0802
         (735 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0344 - 2699464-2699520,2699788-2699939,2700592-2701039           30   2.2  
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251...    29   3.8  
06_01_0117 + 912780-912959,913754-913828,914059-914112,914848-91...    28   6.7  

>05_01_0344 - 2699464-2699520,2699788-2699939,2700592-2701039
          Length = 218

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = +2

Query: 302 CCSLNSYLLQQCHRD 346
           CC+L+S +LQQC+RD
Sbjct: 202 CCTLDSSILQQCYRD 216


>03_05_1091 +
           30322035-30322739,30322861-30324043,30324114-30325105,
           30326409-30326798,30326896-30330060
          Length = 2144

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -1

Query: 537 QFQGSCQICYHNTIVNTFVWQPIVSIHEHNSNYTTVETIKNSELVSNRL 391
           +FQ   QICY   +      Q ++ +H       T   IK+  L +N+L
Sbjct: 704 RFQLMNQICYEKVMAAAGKHQVLIFVHSRKETAKTARAIKDIALSNNKL 752


>06_01_0117 +
           912780-912959,913754-913828,914059-914112,914848-914913,
           915137-915241,915454-915570,915827-915927,916012-916058,
           916664-916735,916828-916983,917139-917368,917472-917511,
           917603-917736,917830-917931,918726-918770,919129-919206,
           919225-919365,919447-919542,919732-919833,920185-920283
          Length = 679

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 251 TFLVRLEFLIGRTVFCYCCSLNSYLLQQCHRDQ 349
           TF+V ++F + +  F +C S+ + LL   H DQ
Sbjct: 502 TFVVNIQFSLEKYQFSFCDSIRARLLYFGHADQ 534


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,846,198
Number of Sequences: 37544
Number of extensions: 372004
Number of successful extensions: 849
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)