Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0802
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.2  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   7.4  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   9.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 553  NYHMITISRQLSDLLSQY 500
            N+ M  I+++L DLLS+Y
Sbjct: 2369 NFSMTAINQELRDLLSEY 2386


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 553  NYHMITISRQLSDLLSQY 500
            N+ M  I+++L DLLS+Y
Sbjct: 2370 NFSMTAINQELRDLLSEY 2387


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 18   DAPEREEQSRLGL*DRDRLQGGTLSGQREESLQDALVL 131
            D  E EE+ +    D D  +GG   GQRE S   + VL
Sbjct: 966  DDEEEEEEEQEEEEDEDE-EGGEEHGQREASAPSSSVL 1002


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 660 NWFVCEETSFQHAT 619
           NW VC+ET   H T
Sbjct: 194 NWRVCDETPSDHNT 207


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,801
Number of Sequences: 2352
Number of extensions: 15514
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)