Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0800
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 194 6e-50
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 188 4e-48
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 186 1e-47
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 120 9e-28
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 78 5e-15
U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily ass... 29 2.3
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 3.0
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 29 3.0
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 29 3.0
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 29 3.9
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 29 3.9
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 29 3.9
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 3.9
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 3.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.9
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 3.9
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 3.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.9
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 3.9
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 29 3.9
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 29 3.9
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 194 bits (472), Expect = 6e-50
Identities = 91/126 (72%), Positives = 105/126 (83%)
Frame = +2
Query: 2 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 181
KVFY KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++ PTHPIRLGLALNF
Sbjct: 117 KVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNF 176
Query: 182 SVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQG 361
SVF+YEILN+PD+AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 177 SVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAAT 236
Query: 362 DGESAD 379
D A+
Sbjct: 237 DDTDAN 242
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 188 bits (457), Expect = 4e-48
Identities = 90/130 (69%), Positives = 105/130 (80%)
Frame = +2
Query: 2 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 181
KVFY KMKGDY+RYLAE A+ DR E S AY+ A DIA ++ PTHPIRLGLALNF
Sbjct: 117 KVFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNF 175
Query: 182 SVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQG 361
SVFYYEILN+P+ AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+
Sbjct: 176 SVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDVGA 235
Query: 362 DGESADAEQK 391
+ + + Q+
Sbjct: 236 EDQEQEGNQE 245
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 186 bits (453), Expect = 1e-47
Identities = 89/130 (68%), Positives = 104/130 (80%)
Frame = +2
Query: 2 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 181
K FY KMKGDY+RYLAE A+ DR E S AY+ A DIA ++ PTHPIRLGLALNF
Sbjct: 117 KAFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNF 175
Query: 182 SVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQG 361
SVFYYEILN+P+ AC+LAK AFDDAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+
Sbjct: 176 SVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDVGA 235
Query: 362 DGESADAEQK 391
+ + + Q+
Sbjct: 236 EDQEQEGNQE 245
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 120 bits (289), Expect = 9e-28
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = +2
Query: 2 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 181
KVFY KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++ PTHPIRLGLALNF
Sbjct: 117 KVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNF 176
Query: 182 SVFYYEILNSPDRACRLAK 238
SVF+YEILN+PD+AC+LAK
Sbjct: 177 SVFFYEILNAPDKACQLAK 195
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 78.2 bits (184), Expect = 5e-15
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +2
Query: 20 MKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYE 199
M D+ RYL ++ N R+E A S +AY+ A IA ++ PTHPIRLGLALN S ++
Sbjct: 1 MVADHFRYLVQYDDIN-REEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFD 59
Query: 200 ILNSPDRACRLAKAAFDDAIAELDTL--SEESYKDSTLIMQLLRDNLTLWTSDMQGDGES 373
+LN P A +A++A D A EL+ + S +SY S L +L T + + DG+
Sbjct: 60 VLNLPKEANEIAQSALDSAHRELEKMKSSLDSYDISNLKRARTLYDLLKSTHEQRVDGKE 119
Query: 374 AD 379
+
Sbjct: 120 GE 121
>U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily
assigned gene nameprotein 52 protein.
Length = 665
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +2
Query: 242 AFDDAIAELDTLSEESYKDSTLIM-----QLLRDNL-TLWTSDMQGDGESADAEQKEPAQ 403
A D+A DTL +ES+K +LI Q RD L + T+DM G+ S +K+PA
Sbjct: 352 AIDNAKKLRDTLRKESFKQKSLIFDKGFWQRNRDKLRNMITADMTGN-ISRVLTRKKPAP 410
Query: 404 DGEDQD 421
E+ D
Sbjct: 411 KLEESD 416
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 281 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 421
E+ Y+D T D + W S + + AE++E +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 137 LPPTHPIRLGLALNFSVFYYEILNSPDRACR--LAKAAFDDAIAELDTLSEESYK 295
+PP H R +A + SV Y+ PDR+ L D+ E D LSEE +K
Sbjct: 476 IPPLHYQRPAVAPSDSVSCYDEPTQPDRSLEDVLYGDLGDEYRVESDELSEEKFK 530
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 137 LPPTHPIRLGLALNFSVFYYEILNSPDRACR--LAKAAFDDAIAELDTLSEESYK 295
+PP H R +A + SV Y+ PDR+ L D+ E D LSEE +K
Sbjct: 478 IPPLHYQRPAVAPSDSVSCYDEPTQPDRSLEDVLYGDLGDEYRVESDELSEEKFK 532
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 281 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 421
E+ Y+D T D + W S + + AE++E +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 281 EESYKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 421
E+ Y+D T D + W S + + AE++E +D +D D
Sbjct: 136 EKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 413 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 461
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 523 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 571
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1427 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1427 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1427 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1433 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1433 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1427 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1475
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1433 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 1433 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 1481
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 530 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 578
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 65 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP 214
ND EAA + + A I LPP PI LA++ + EI +P
Sbjct: 603 NDDNEAATEGRIGFMAEPKIRSDALPPQQPI-CTLAISLPEYTGEIKTAP 651
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 301 GVLVALLRERVQFGDGVVEGGLGEPAGAVRAVQDLVV 191
GVLV L R+ GD VEGG+ A+ V +LV+
Sbjct: 136 GVLVVLAIMRIVSGDYEVEGGIMALTAALGVVVNLVM 172
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 236 KAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 346
K FD I E+D + ES+ + I+Q++ ++ L+T
Sbjct: 223 KCPFDRKIIEMDGRNVESFPKNYTILQMVTHSINLYT 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,005,054
Number of Sequences: 27780
Number of extensions: 196607
Number of successful extensions: 752
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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