Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0799
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.5  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +1

Query: 550  PIVKSK--YLHKNERTLRYNLIRRVSHKLK 633
            P+++ +  YL++NE T    LI +  H ++
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLHPIE 1208


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +1

Query: 550  PIVKSK--YLHKNERTLRYNLIRRVSHKLK 633
            P+++ +  YL++NE T    LI +  H ++
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLHPIE 1208


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 685 KKYN*IDIEKRQTYLVKILTYETHD 611
           K+Y   D+EKR+     I   E H+
Sbjct: 71  KRYKLNDLEKRREVYESIFKVEVHE 95


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 685 KKYN*IDIEKRQTYLVKILTYETHD 611
           K+Y   D+EKR+     I   E H+
Sbjct: 231 KRYKLNDLEKRREVYESIFKVEVHE 255


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 685 KKYN*IDIEKRQTYLVKILTYETHD 611
           K+Y   D+EKR+     I   E H+
Sbjct: 231 KRYKLNDLEKRREVYESIFKVEVHE 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,772
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)