Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0798
         (683 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0091 + 646299-649082                                             31   0.64 
12_02_0641 + 21450262-21450603,21450691-21450963,21451600-214518...    29   2.6  
12_02_0638 + 21439600-21439941,21440029-21440301,21440938-214412...    29   2.6  
03_05_0435 - 24259864-24260206,24260302-24260467,24261175-242612...    28   6.0  
09_04_0267 - 16246512-16246689,16247047-16247183,16247376-162474...    28   7.9  
03_02_0178 + 6195402-6199158,6199438-6200003                           28   7.9  

>02_01_0091 + 646299-649082
          Length = 927

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = +3

Query: 186 LTFSSLVYSTIKLASESCSCKNSDVCTYVYRGVNCLF*FSFLDSKRNLFK 335
           L F  L+ + ++L S SCSC NSD C       NC+  F+  D  R+L K
Sbjct: 858 LLFGELLVAALELVS-SCSCTNSDGCP------NCIQSFACSDYNRDLDK 900


>12_02_0641 +
           21450262-21450603,21450691-21450963,21451600-21451869,
           21452071-21452368,21452455-21452921
          Length = 549

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 309 GKRIKTNNLHHDIRTYIHRCFYNCNSRWQV 220
           G++ K N LH  +RT I RCF     +W +
Sbjct: 432 GEKEKFNFLHSSLRTIIERCFGVWKMKWWI 461


>12_02_0638 +
           21439600-21439941,21440029-21440301,21440938-21441207,
           21441409-21441706,21441793-21442259
          Length = 549

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 309 GKRIKTNNLHHDIRTYIHRCFYNCNSRWQV 220
           G++ K N LH  +RT I RCF     +W +
Sbjct: 432 GEKEKFNFLHSSLRTIIERCFGVWKMKWWI 461


>03_05_0435 -
           24259864-24260206,24260302-24260467,24261175-24261241,
           24261553-24261648,24261718-24261898,24262252-24262323,
           24262393-24262505,24262596-24262817,24263262-24263910,
           24264118-24264206,24265932-24266015,24266219-24266358,
           24266522-24266573
          Length = 757

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 96  QNIFHSTTTKCSCSKA*CTNKFCLRC**VCLTFSSLVYSTIKLASESCSCK 248
           QN    +  +CSC K+ C   +C  C      F+S VY      SESCSC+
Sbjct: 454 QNDNVDSCKRCSCKKSKCLKLYC-EC------FASKVY-----CSESCSCR 492


>09_04_0267 -
           16246512-16246689,16247047-16247183,16247376-16247471,
           16247658-16248579,16249396-16249455,16249860-16250125
          Length = 552

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +1

Query: 190 LFQALFIQL*NLPARVAVVKTAMYVRTYIVV*IVCFDSLSWIQNEIYLKPKIVLFTH*W 366
           +F +L   L  L AR ++ K  +Y +  I + +    S+ WI  EIY K   V F   W
Sbjct: 404 IFISLAKTLDKLQARRSMAKLDIYRKFTIALAVTVLVSIGWIGYEIYFKSTDV-FNERW 461


>03_02_0178 + 6195402-6199158,6199438-6200003
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 147  CTNKFCLRC**VCLTFSSLVYSTIKLASESCSCKNSDVCTY 269
            C  K C R    C +   +V S   +AS +CS    DVC +
Sbjct: 1100 CDCKVCQRKTGFCSSCMCIVCSNFDMASNTCSWVGCDVCLH 1140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,908,369
Number of Sequences: 37544
Number of extensions: 240221
Number of successful extensions: 424
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)