Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0795
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    49   1e-04
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    37   0.41 
UniRef50_Q3SI87 Cluster: Putative uncharacterized protein precur...    34   2.9  
UniRef50_A5K2E2 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q4YHH5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_UPI0000D56E1D Cluster: PREDICTED: similar to CG9936-PD,...    33   8.9  
UniRef50_Q0LRY5 Cluster: Beta-lactamase precursor; n=2; Caulobac...    33   8.9  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = -2

Query: 252 SLATKGSASKLTHRHSPLSFSPDLLSGSRFRSGGRFCEALFLPVLA 115
           SL T G +++  HR  PLSFSPDLLSGSRFR+G  + E L L  +A
Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY-EMLGLGTIA 424


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 204 PLSFSPDLLSGSRFRSGGRFCEALFL--PVLATPPGLIPESSPTR*GNADIA 55
           P+ F       SRFRS GRFCEAL L   VLA    L P   P R   A IA
Sbjct: 74  PMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNRPRVAGIA 125


>UniRef50_Q3SI87 Cluster: Putative uncharacterized protein
           precursor; n=1; Thiobacillus denitrificans ATCC
           25259|Rep: Putative uncharacterized protein precursor -
           Thiobacillus denitrificans (strain ATCC 25259)
          Length = 389

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
 Frame = -2

Query: 417 ETYYCFTAEIGRVVVFLLTDLHNALPPVKLRVEDGRYARKRG*YLPMRAHFSSNPSLATK 238
           E  Y F A      +  L + ++++PP +L   D R    R  YL ++A  +++ S+A  
Sbjct: 200 ERSYTFNARQIDAAMAYLKNANDSIPPNRLTAADARKPSGRA-YLALQAGLAASTSMAYF 258

Query: 237 GSASKLTHRHSPLSFSPDLL----SGSRFRSGGR-FCEALFLP 124
            S   L  R +PL  + D+L      S + SGGR F +A   P
Sbjct: 259 PSELALAER-TPLRGTQDVLRLLEKSSAYPSGGRGFVDANDFP 300


>UniRef50_A5K2E2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1833

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = -1

Query: 514  QHYKNDLFIYFCTVDVDYLFTEYFILRAVNSNRNVLLLYSRNRQGGGISSY 362
            +H++  L   FC+   ++ FT + I++   +N  + LLY R  +G  +S +
Sbjct: 1759 EHFQFPLVFIFCSDSRNFHFTHFDIIKISKNNNLIYLLYKRGNEGLFLSGF 1809


>UniRef50_Q4YHH5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 70

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 526 TKYGQHYKNDLFIYFCTVDVDYLFTEYFILRAVNSNRNVLLLYSRN 389
           T+ GQ Y  D FIYF  +      T YF L  + SN+ + + +S+N
Sbjct: 4   TEIGQDYNKDFFIYFSFI------TLYFFLNIIFSNKKIEIKHSQN 43


>UniRef50_UPI0000D56E1D Cluster: PREDICTED: similar to CG9936-PD,
           isoform D; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG9936-PD, isoform D - Tribolium castaneum
          Length = 2052

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = -2

Query: 264 SSNPSLATKGSASKLTHRHSPLSFSPDLLSGSRFRSGG-----RFCEALFLPVLATPPGL 100
           S  PS A +G      HR SP+    D  SGS    GG     R  E++ +P + +PP +
Sbjct: 440 SPRPSKAVRGRVP--FHRRSPVPADSDRCSGSYTPQGGPPSYPRTQESVAIPSVGSPPSV 497

Query: 99  IPESSP 82
            P   P
Sbjct: 498 APSPLP 503


>UniRef50_Q0LRY5 Cluster: Beta-lactamase precursor; n=2; Caulobacter
           sp. K31|Rep: Beta-lactamase precursor - Caulobacter sp.
           K31
          Length = 438

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 22/85 (25%), Positives = 39/85 (45%)
 Frame = -2

Query: 366 LTDLHNALPPVKLRVEDGRYARKRG*YLPMRAHFSSNPSLATKGSASKLTHRHSPLSFSP 187
           + D +  +PP K       YAR+ G + P RA F  +P+    G+   ++  H  + F  
Sbjct: 269 MRDTYFNVPPAKYGRILTLYARQYGGWQPQRATFGYSPTPYISGAGGAMSTAHDYIQFEE 328

Query: 186 DLLSGSRFRSGGRFCEALFLPVLAT 112
            LL+     +G R  +   + ++AT
Sbjct: 329 MLLNRGEL-NGKRLLKPESVALMAT 352


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,283,103
Number of Sequences: 1657284
Number of extensions: 15122759
Number of successful extensions: 33811
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33796
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)