Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0795
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.0  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 282 PMRAHFSSNPSLATKGSASKLTH-RHSPLSFS 190
           P   H SS+P++ T G   +L    H PL+ +
Sbjct: 238 PHPPHLSSHPAIVTPGPKQELPDLNHKPLNLT 269


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 282 PMRAHFSSNPSLATKGSASKLTH-RHSPLSFS 190
           P   H SS+P++ T G   +L    H PL+ +
Sbjct: 130 PHPPHLSSHPAIVTPGPKQELPDLNHKPLNLT 161


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +3

Query: 237 PSSQETGSMRSELAWVGTTPSSSHIYHLRHAILLVVRHCVSP*EEIP 377
           P  Q T S  S  +    +PS S        + LVVR C  P EE P
Sbjct: 201 PIPQRTASTASSAS--NYSPSQSPEPESVRPLSLVVRRCEEPTEEKP 245


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 273 AHFSSNPSLATKGSASKLTHRHSP 202
           AH +SN + AT    SKL  R +P
Sbjct: 588 AHLNSNEARATLNWVSKLIIRSNP 611


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 136 TVLASAGNTSWFDPRELTYTL 74
           TVL +  +T ++DPR L+  L
Sbjct: 218 TVLPNVNSTVYYDPRALSPNL 238


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 514 QHYKNDLFIYFCTVDVDYLFTEYFILRAVNSNRNVLLLYSRN 389
           ++++N  +I+F    + YL T+  ++R    NR +L   SRN
Sbjct: 153 EYFQN--YIHFFYQLLLYLITDMILMRYKELNRVILDNMSRN 192


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 535 GNVSGVRVQETHCLCVNGVCGLSALNYTVYNLYI*MRNYRKPHTPYTLFSEM*H 696
           G++ GVR      +  N    + A  + VY+  I     R P  PYTL+  M H
Sbjct: 287 GSIIGVRAPYLR-VGGNKQFEMMADQFFVYDASITASLGRVPIWPYTLYFRMPH 339


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 535 GNVSGVRVQETHCLCVNGVCGLSALNYTVYNLYI*MRNYRKPHTPYTLFSEM*H 696
           G++ GVR      +  N    + A  + VY+  I     R P  PYTL+  M H
Sbjct: 294 GSIIGVRAPYLR-VGGNKQFEMMADQFFVYDASITASLGRVPIWPYTLYFRMPH 346


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 387 GRVVVFLLTDLHNAL 343
           GRV V++  +LH AL
Sbjct: 233 GRVAVWMCNNLHKAL 247


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 387 GRVVVFLLTDLHNAL 343
           GRV V++  +LH AL
Sbjct: 233 GRVAVWMCNNLHKAL 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,161
Number of Sequences: 336
Number of extensions: 4325
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)