Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0795
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.6  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   2.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.4  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   6.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 84  VSSRGSNQEVLPALARTVLRRIY 152
           V S G   E  P LAR+VL +IY
Sbjct: 668 VGSLGKLTETNPKLARSVLYKIY 690


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 121 HWQEQCFAESTTGSETRPTEK 183
           HWQ  C A S    +T P+ K
Sbjct: 384 HWQMSCVACSPPPRQTPPSRK 404


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 142 AESTTGSETRPTEKIRRETQ 201
           A  TTG+ T PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 21  VFFSIYADCLDRLYQHYPNV 80
           VFFSIY   LD  +++  N+
Sbjct: 416 VFFSIYKTILDYYHKYKENL 435


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 21  VFFSIYADCLDRLYQHYPNV 80
           VFFSIY   LD  +++  N+
Sbjct: 416 VFFSIYKTILDYYHKYKENL 435


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 21  VFFSIYADCLDRLYQHYPNV 80
           VFFSIY   LD  +++  N+
Sbjct: 42  VFFSIYKTILDYYHKYKENL 61


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 635 FKCEITGNPTRRIRYL 682
           F C + GNP + + +L
Sbjct: 327 FTCNVRGNPIKTVSWL 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,572
Number of Sequences: 438
Number of extensions: 4742
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)