Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0792
         (663 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5TWK7 Cluster: ENSANGP00000027942; n=1; Anopheles gamb...    35   1.5  
UniRef50_Q4HQ14 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  
UniRef50_Q16WW2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.1  

>UniRef50_Q5TWK7 Cluster: ENSANGP00000027942; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000027942 - Anopheles gambiae
           str. PEST
          Length = 414

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +3

Query: 228 QDTEQLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQSQETLDHTYLPQPLSSLDVSS 407
           ++  + VC EC   +RKF  +  +V N Q +L+ +    S+ ++  T L +P+ + D  +
Sbjct: 14  EELPKFVCTECSITVRKFYNYTLEVQNTQSYLERECNVASKSSITITKL-EPIGNCDEEN 72

Query: 408 KCD 416
            C+
Sbjct: 73  DCN 75


>UniRef50_Q4HQ14 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter upsaliensis RM3195|Rep: Putative
           uncharacterized protein - Campylobacter upsaliensis
           RM3195
          Length = 170

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = +3

Query: 66  IKMEQDVDNNFKIICSTCLCGDRKLFALNNTQEVYQIFRLLMFDFA-GEAMGDSVQDTEQ 242
           IK E D+DN  ++  S  +C +      +  +E YQ   L +F    G AMG++++  + 
Sbjct: 40  IKFE-DIDNMTEL--SEFVCNEYLNATTDEEREKYQDMMLTLFTVKFGVAMGEAMKK-QG 95

Query: 243 LVCWECLAIMRKFLKFKWQVHNAQEHLK 326
           + C + + I   F + +W+V++ +EH K
Sbjct: 96  ITCPQDMDI-ELFKQARWEVNSNEEHFK 122


>UniRef50_Q16WW2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 268

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 4/140 (2%)
 Frame = +3

Query: 240 QLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQSQETLDHTYLPQPLSSLDVSSKCDY 419
           Q++C  CL  +++F +F+ +    Q  L    +    E+ D T   + +    +S KC  
Sbjct: 59  QIICTRCLTQLKEFREFQQRCIGVQNVLLNGTVKSEPESSDGT--DEKVCRFCLSKKC-V 115

Query: 420 DKIXXXXXXXXXXXQYISITNSEDVKSEHYDMVTAVR--DNINLQIEDHILEVPEFVLGG 593
           D+             Y+SI   +D KS     V  ++  D  N Q+    LEV   +L G
Sbjct: 116 DETFHQGDLPRWISDYLSIILDQDCKSRFCCTVCKIQLEDFRNFQL--RCLEVQNELLNG 173

Query: 594 PVSDVMSHIV--VGTDELTT 647
             + V +     +G D  T+
Sbjct: 174 KPTSVKNEPAKDIGMDSETS 193


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,367,761
Number of Sequences: 1657284
Number of extensions: 12496528
Number of successful extensions: 32983
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32979
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)