Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0792
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069549-1|AAL39694.1|  434|Drosophila melanogaster LD27553p pro...    30   2.4  
AF017096-1|AAC39085.1|  347|Drosophila melanogaster protein ( Dr...    30   2.4  
AE014297-671|AAF54165.2|  434|Drosophila melanogaster CG2678-PA ...    30   2.4  
AE014297-1649|AAF54923.1|  332|Drosophila melanogaster CG8644-PA...    29   5.6  
BT030415-1|ABO52835.1|  735|Drosophila melanogaster IP15836p pro...    29   7.5  

>AY069549-1|AAL39694.1|  434|Drosophila melanogaster LD27553p
           protein.
          Length = 434

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 240 QLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQS 347
           Q +C  C+  ++   +FKWQ   + +H   + LNQS
Sbjct: 58  QFICVSCVLAVQNAFRFKWQSEQSYQHF-FRVLNQS 92


>AF017096-1|AAC39085.1|  347|Drosophila melanogaster protein (
           Drosophila melanogasterprophosphoribosylamidotransferase
           (Prat) gene, completecds. ).
          Length = 347

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 240 QLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQS 347
           Q +C  C+  ++   +FKWQ   + +H   + LNQS
Sbjct: 58  QFICVSCVLAVQNAFRFKWQSEQSYQHF-FRVLNQS 92


>AE014297-671|AAF54165.2|  434|Drosophila melanogaster CG2678-PA
           protein.
          Length = 434

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 240 QLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQS 347
           Q +C  C+  ++   +FKWQ   + +H   + LNQS
Sbjct: 58  QFICVSCVLAVQNAFRFKWQSEQSYQHF-FRVLNQS 92


>AE014297-1649|AAF54923.1|  332|Drosophila melanogaster CG8644-PA
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +3

Query: 390 SLDVSSKCDYDKIXXXXXXXXXXXQYISITNSEDVKSEHYDMVTAV 527
           SLD+S+   + K+           +++++ NSE+ + + YDM+T V
Sbjct: 191 SLDMSNDIVHVKLDGENLKEIIGARWLTLDNSEEGRGKKYDMITKV 236


>BT030415-1|ABO52835.1|  735|Drosophila melanogaster IP15836p
           protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = -3

Query: 265 AKHSQQTSCSVS*TESPIASPAKSNINKRKI*YTSWVLFKANSLRSPHKHVLQMILKLLS 86
           A HS + +C      + I   A   +    + Y S  L   +  R PHK+   ++ KL  
Sbjct: 661 ATHSGEYTCVAKNPAAEIKYTALLQVKGSVLAYPSQKLNTEHKKRKPHKYRSHLLSKLKL 720

Query: 85  TSCSILI 65
           + CS+ +
Sbjct: 721 SQCSLTL 727


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,889,343
Number of Sequences: 53049
Number of extensions: 612503
Number of successful extensions: 1733
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)