Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0787
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 34 0.019
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.71
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.94
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 28 1.2
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 27 2.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.9
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 27 2.9
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 5.0
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 26 5.0
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 26 6.6
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 6.6
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 25 8.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 8.8
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.8
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 8.8
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 34.3 bits (75), Expect = 0.019
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
Frame = +2
Query: 275 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
+S S+ PQS +ASS T +T S +S + +P+T S +
Sbjct: 468 VSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPS 527
Query: 455 CGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVN-----ITSVSRALPAST 619
+I S+ + S++ P S + S T+ I+ + +SVS L +ST
Sbjct: 528 SSII---SSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST 584
Query: 620 VAPSGTVFKIGDA 658
+PS T I +
Sbjct: 585 SSPSSTSLSISSS 597
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.71
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Frame = +2
Query: 215 SLSTPQIPNXXXXXXXXXXXLSAERGHSL----SPQSPLLTVRDCTASSLMKTSATFSGT 382
SLST IP+ LS+ S S S +++ ++SS TS+T S +
Sbjct: 234 SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSS 293
Query: 383 AGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTL 562
+ + P +++ ++ S +S + S+ + + ++ P S T++ S+ +
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTL---SSSSMSSSSSFSSSPTSSSSTISSSSSSP 350
Query: 563 IPKIAVNITSVSRALP--ASTVAPSGT 637
+ TS S++ +STV+ S +
Sbjct: 351 SSSSFSSTTSSSKSSSSFSSTVSSSSS 377
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.7 bits (61), Expect = 0.94
Identities = 29/116 (25%), Positives = 45/116 (38%)
Frame = +2
Query: 290 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIR 469
GH+ + S T TA+S + +SAT S T+ + + D+ T PAS+
Sbjct: 141 GHASASTSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFS 200
Query: 470 FRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSGT 637
T + S+ SP S+ I+ S S LP S + + T
Sbjct: 201 -TITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVISSASLSSSSVLPTSIITSTST 255
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = +1
Query: 148 ISCDKYWKCDN----GVAELKTCGNGLAFDATDS--KYLTENCDYLHN 273
+ CD+ W C+N G+ L C NG+ +D K L D L N
Sbjct: 30 LKCDRVWPCENCKKRGIPNL--CPNGILVSVSDKLIKLLLSRIDTLQN 75
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 299 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 421
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 2.9
Identities = 38/174 (21%), Positives = 57/174 (32%)
Frame = +2
Query: 176 TTV*PN*KPAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLM 355
T V P P +T S STP P ++ G S SP T CT S+ +
Sbjct: 299 TPVTPTVPPTSTSSTSTPPPPAS-----------TSSTGTSSSPLPSTST--SCTTSTSI 345
Query: 356 KTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSP 535
+ + PP +++ P + S+ G T T S + PP +
Sbjct: 346 PPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNS 405
Query: 536 TLARSAVTLIPKIAVNITSVSRALPASTVAPSGTVFKIGDADGTGNCEDPEDVP 697
T +P + + + ST P + T NC VP
Sbjct: 406 T--TPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVP 457
Score = 25.8 bits (54), Expect = 6.6
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Frame = +2
Query: 311 SPLLTVR-DCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKT 487
SPL T CT S+ + + + PP +++ P + S+ G T
Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335
Query: 488 KK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSGT 637
T S + PP + T +P + + TS PAST + +GT
Sbjct: 336 STSCTTSTSIPPTGNST--TPVTPTVPPTSTSSTSTPPP-PAST-SSTGT 381
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 299 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 421
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 172 CDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 282
C N V LK NG + S+ L+E C Y N C
Sbjct: 374 CSNAVKNLKCSANGTPSGSKISQVLSELC-YYDNKAC 409
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 512 AQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSGT 637
A PV S T +RSAV P + +N + + + + P GT
Sbjct: 203 ASQPVPSSTFSRSAVVPNPSLPLNPSVLQGQVMNNPTIPKGT 244
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.8 bits (54), Expect = 6.6
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 389 TEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT-LARSAVTLI 565
T P S +LPT + S +S + QT +PP SPT + ++ ++
Sbjct: 135 TTFPSTTSITENLPTIDPTRSTRSSSHIQSLSPESKQTSDGHRPP--SPTSITTTSTSID 192
Query: 566 PKIAVNITSVSRALPASTVAP 628
P +A +S S T AP
Sbjct: 193 PSVA--FSSKSTLATTRTNAP 211
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 308 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1191 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1238
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 308 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1273 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1320
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 518 PPVRSPTLARSAVTLIPKIAVNITSVSRALPAS 616
P +RS +L S V LIP + + + S + PAS
Sbjct: 439 PSIRSLSLRPSQVPLIPPLKCDPNAFSASTPAS 471
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 8.8
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 338 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQ 517
T+SSL +SAT S A + + A+ + ++ +S+ S+ T S++
Sbjct: 105 TSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSST 164
Query: 518 PPVRSPTLARSAV-TLIPKIAVNITSVSRALPASTV 622
S T SA + + A + ++ S +L +S++
Sbjct: 165 NSTTSATPTSSATSSSLSSTAASNSATSSSLASSSL 200
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 500 TDSAAQPPVRSPTLARSAV 556
++SAA PPV SP L RS +
Sbjct: 479 SNSAASPPVSSPGLRRSHI 497
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 8.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 346 FPDENKCDVFWNCW 387
F D N D +WNCW
Sbjct: 350 FADRNFYDDWWNCW 363
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,117,268
Number of Sequences: 5004
Number of extensions: 64653
Number of successful extensions: 225
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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