Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0781
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070684-1|AAL48155.1|   70|Drosophila melanogaster RH19248p pro...    47   2e-05
AE014297-1642|AAF54916.1|   70|Drosophila melanogaster CG11686-P...    47   2e-05
AE014134-1839|AAF52914.1|  553|Drosophila melanogaster CG5375-PA...    28   8.9  

>AY070684-1|AAL48155.1|   70|Drosophila melanogaster RH19248p
           protein.
          Length = 70

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +2

Query: 152 VLPFTVCIEALSGLADFLLSVVQFPKYCAQAMMEGR 259
           V  F  CI AL+G++D LL  VQFP YC +AM+EG+
Sbjct: 32  VYAFASCIPALTGISDILLQGVQFPFYCGKAMLEGK 67


>AE014297-1642|AAF54916.1|   70|Drosophila melanogaster CG11686-PA
           protein.
          Length = 70

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +2

Query: 152 VLPFTVCIEALSGLADFLLSVVQFPKYCAQAMMEGR 259
           V  F  CI AL+G++D LL  VQFP YC +AM+EG+
Sbjct: 32  VYAFASCIPALTGISDILLQGVQFPFYCGKAMLEGK 67


>AE014134-1839|AAF52914.1|  553|Drosophila melanogaster CG5375-PA
           protein.
          Length = 553

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 169 HCERKYNNVDASRYSSYPEGNEYQND*PDYGKQHV 65
           + +RKY   DA +YSS PE N  +ND P+  +  +
Sbjct: 256 YSQRKYIICDADQYSSVPEKN--KNDSPNLNQAEI 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,617,801
Number of Sequences: 53049
Number of extensions: 555092
Number of successful extensions: 1166
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)