Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0779
         (335 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IVB5 Cluster: LIX1-like protein; n=31; Eumetazoa|Rep:...    91   6e-18
UniRef50_Q8N485 Cluster: Protein limb expression 1 homolog; n=23...    71   4e-12
UniRef50_Q4RUT4 Cluster: Chromosome 12 SCAF14993, whole genome s...    54   6e-07
UniRef50_UPI0000D56BA6 Cluster: PREDICTED: similar to zinc finge...    31   3.8  
UniRef50_A5UX52 Cluster: Metallophosphoesterase precursor; n=1; ...    30   8.9  
UniRef50_A3NX30 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_Q8IVB5 Cluster: LIX1-like protein; n=31; Eumetazoa|Rep:
           LIX1-like protein - Homo sapiens (Human)
          Length = 337

 Score = 90.6 bits (215), Expect = 6e-18
 Identities = 40/61 (65%), Positives = 45/61 (73%)
 Frame = +2

Query: 152 VNVVEALQEFWQVKXXXXXXXXXXXLVIYQSVPAAHPSYVCYVTLPGGACFGSFQNCPTK 331
           VNVVEALQEFWQ+K           LV+Y+ VP+  P YVCYVTLPGG+CFGSFQ CPTK
Sbjct: 98  VNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTK 157

Query: 332 A 334
           A
Sbjct: 158 A 158


>UniRef50_Q8N485 Cluster: Protein limb expression 1 homolog; n=23;
           Coelomata|Rep: Protein limb expression 1 homolog - Homo
           sapiens (Human)
          Length = 282

 Score = 71.3 bits (167), Expect = 4e-12
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = +2

Query: 140 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYQSVPAAHPSYVCYVTLPGGACFGSFQN 319
           V   +NVV  LQEFW+ K           +V+Y+S+PA  P +V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 320 CPTKA 334
           C ++A
Sbjct: 84  CLSRA 88


>UniRef50_Q4RUT4 Cluster: Chromosome 12 SCAF14993, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 12 SCAF14993, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 666

 Score = 54.0 bits (124), Expect = 6e-07
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = +2

Query: 227 LVIYQSVPAAHPSYVCYVTLPGGACFGSFQNC 322
           L++Y+S P   P YVCYVTLPGG+CFG+++ C
Sbjct: 40  LILYESAPTPGPPYVCYVTLPGGSCFGNYKVC 71


>UniRef50_UPI0000D56BA6 Cluster: PREDICTED: similar to zinc finger
           protein 650; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to zinc finger protein 650 - Tribolium castaneum
          Length = 1281

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 210 ARWAAPSSFTSLCRLPIRPTSATSRSPVE 296
           A W A  +F  LC LP +P S T+ +PVE
Sbjct: 896 AMWPAWMTFQQLCGLPPKPPSDTALAPVE 924


>UniRef50_A5UX52 Cluster: Metallophosphoesterase precursor; n=1;
           Roseiflexus sp. RS-1|Rep: Metallophosphoesterase
           precursor - Roseiflexus sp. RS-1
          Length = 865

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +3

Query: 180 FGR*RRHEAGARWAAPSSFTSLCRLPIRPTSATSRSPVERALAVFKTAQLKR 335
           FG    HEA  RW   + FT   R  +   S     P  R  A  +  QLKR
Sbjct: 260 FGAIGNHEAPGRWRPNAEFTLNGRTQVANLSFMDNDPQPRWFAEIRYEQLKR 311


>UniRef50_A3NX30 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia pseudomallei 1106a|Rep: Putative
           uncharacterized protein - Burkholderia pseudomallei
           (strain 1106a)
          Length = 104

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 195 RHEAGARWAAPSSFTSLCRLPIRPTSATSR 284
           R+EA  RWA PS+    CR P+ P   T+R
Sbjct: 44  RNEAAVRWAVPSARARRCR-PMVPVMLTTR 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,696,980
Number of Sequences: 1657284
Number of extensions: 4007996
Number of successful extensions: 11805
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11805
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)