Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0779
         (335 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024350-1|ABC86412.1|  268|Drosophila melanogaster IP09446p pro...    91   3e-19
AE014134-1854|AAF52926.1|  268|Drosophila melanogaster CG13139-P...    91   3e-19
AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-P...    28   3.5  
U19731-1|AAB60231.1|  400|Drosophila melanogaster phyllopod prot...    27   8.0  
L38294-1|AAA66168.1|  400|Drosophila melanogaster protein ( Dros...    27   8.0  
AY075531-1|AAL68338.1|  400|Drosophila melanogaster RH04401p pro...    27   8.0  
AE013599-1895|AAF58245.1|  400|Drosophila melanogaster CG10108-P...    27   8.0  

>BT024350-1|ABC86412.1|  268|Drosophila melanogaster IP09446p
           protein.
          Length = 268

 Score = 91.1 bits (216), Expect = 3e-19
 Identities = 39/61 (63%), Positives = 46/61 (75%)
 Frame = +2

Query: 152 VNVVEALQEFWQVKXXXXXXXXXXXLVIYQSVPAAHPSYVCYVTLPGGACFGSFQNCPTK 331
           VNVVEALQEFWQ+K           LVIY+S+P+    Y+C+VTLPGG+CFGSFQNCPTK
Sbjct: 25  VNVVEALQEFWQMKQSRGAELKNGALVIYESIPSNSQPYICFVTLPGGSCFGSFQNCPTK 84

Query: 332 A 334
           A
Sbjct: 85  A 85


>AE014134-1854|AAF52926.1|  268|Drosophila melanogaster CG13139-PA
           protein.
          Length = 268

 Score = 91.1 bits (216), Expect = 3e-19
 Identities = 39/61 (63%), Positives = 46/61 (75%)
 Frame = +2

Query: 152 VNVVEALQEFWQVKXXXXXXXXXXXLVIYQSVPAAHPSYVCYVTLPGGACFGSFQNCPTK 331
           VNVVEALQEFWQ+K           LVIY+S+P+    Y+C+VTLPGG+CFGSFQNCPTK
Sbjct: 25  VNVVEALQEFWQMKQSRGAELKNGALVIYESIPSNSQPYICFVTLPGGSCFGSFQNCPTK 84

Query: 332 A 334
           A
Sbjct: 85  A 85


>AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-PA,
            isoform A protein.
          Length = 1788

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +3

Query: 192  RRHEAGARWAAPSSFTSLC---RLPIRPTSATSRSP 290
            RRH   +R +AP++ +  C   +LP+ P +ATS+ P
Sbjct: 1187 RRHAVSSR-SAPAAESESCAQQQLPVEPAAATSQPP 1221


>U19731-1|AAB60231.1|  400|Drosophila melanogaster phyllopod
           protein.
          Length = 400

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 238 PVCAGCPSVLRLLRHAPRWS 297
           P C+  P ++  L+ APRW+
Sbjct: 278 PACSKLPQIMSPLKEAPRWT 297


>L38294-1|AAA66168.1|  400|Drosophila melanogaster protein (
           Drosophila melanogasterphyllopod mRNA. ).
          Length = 400

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 238 PVCAGCPSVLRLLRHAPRWS 297
           P C+  P ++  L+ APRW+
Sbjct: 274 PACSKLPQIMSPLKEAPRWT 293


>AY075531-1|AAL68338.1|  400|Drosophila melanogaster RH04401p
           protein.
          Length = 400

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 238 PVCAGCPSVLRLLRHAPRWS 297
           P C+  P ++  L+ APRW+
Sbjct: 278 PACSKLPQIMSPLKEAPRWT 297


>AE013599-1895|AAF58245.1|  400|Drosophila melanogaster CG10108-PA
           protein.
          Length = 400

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 238 PVCAGCPSVLRLLRHAPRWS 297
           P C+  P ++  L+ APRW+
Sbjct: 278 PACSKLPQIMSPLKEAPRWT 297


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,448,441
Number of Sequences: 53049
Number of extensions: 180999
Number of successful extensions: 434
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)