Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0778
(615 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 33 0.007
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 31 0.039
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 30 0.068
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 27 0.36
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 27 0.48
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 27 0.48
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 26 0.84
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 25 1.9
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 2.6
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 24 3.4
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 24 3.4
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 24 3.4
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 24 3.4
AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 24 4.5
AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 24 4.5
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 23 5.9
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 33.1 bits (72), Expect = 0.007
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 133 PITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVETVRDRAAFILR 2
P+ + + ++YLG L +++RPHVE V D+A ++R
Sbjct: 726 PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVR 769
Score = 23.8 bits (49), Expect = 4.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 86 IPRLHPRQRDDIPSPRRNGTRSRR 15
+P + PR R PSPR R RR
Sbjct: 1106 VPPIPPRSRRLPPSPRTTEMRRRR 1129
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 30.7 bits (66), Expect = 0.039
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -3
Query: 130 ITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVETVRDRAAFILR 2
IT+ +P++ +KYLG L +++ PHV+ V +A I++
Sbjct: 732 ITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIVQ 774
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 29.9 bits (64), Expect = 0.068
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -3
Query: 151 NTSAVSPITLF--DQPIPWAPKVKYLGFTLDRGMTFRPHVETVRDRAAFI 8
+T A + IT+ D + + ++YLG TL +++ PHV+ V +RA I
Sbjct: 708 STKAPTRITVRVGDVDVTSSRSIRYLGVTLQDKLSWLPHVKEVTERAGKI 757
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 27.5 bits (58), Expect = 0.36
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 130 ITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVE 35
I + D+ I +KYLG +D ++FR HVE
Sbjct: 692 IRVGDERIESIRHLKYLGVIIDDRLSFRKHVE 723
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 27.1 bits (57), Expect = 0.48
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -3
Query: 130 ITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVETVRDRAAFIL 5
IT +P++ +KYLG + +++ PHV+ + +A I+
Sbjct: 793 ITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 0.48
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 109 IPWAPKVKYLGFTLDRGMTFRPHVETVRDRAAFI 8
+P++ +K+LG + +++ PHV V RA I
Sbjct: 744 VPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQI 777
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.2 bits (55), Expect = 0.84
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 130 ITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVETVRDRA 17
I + D + + ++YLG TL +++ PHV V RA
Sbjct: 784 IRVGDVEVTSSRTMRYLGVTLHDHLSWLPHVREVTTRA 821
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 91 VKYLGFTLDRGMTFRPHVETVRDRA 17
+KYLG +D + + H++ V +RA
Sbjct: 714 LKYLGIMIDDRLEYTQHIKYVAERA 738
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 24.6 bits (51), Expect = 2.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 593 LFSKHFCRAHYTSFTNQ*SEGIYKAYTM 510
L SK F AH+ T+ GIY Y M
Sbjct: 2174 LISKTFFTAHWQKATSPLRNGIYTEYLM 2201
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -3
Query: 118 DQPIPWAPKVKYLGFTLDRGMTFRPHVETVRDRAAFIL 5
D + + ++YLG L + +R HV V ++A+ ++
Sbjct: 781 DVEVQSSRSIRYLGVQLQDHLKWRDHVTKVSEKASRVV 818
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 24.2 bits (50), Expect = 3.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 145 SAVSPITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVETVRD 23
S V P+T +P+P K + +RG RP +RD
Sbjct: 255 SRVRPLTSLREPLPEGYFPKIVRSLTNRGFPARPQNTILRD 295
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.2 bits (50), Expect = 3.4
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 91 VKYLGFTLDRGMTFRPHVETVRDRA 17
++YLG +D ++++ HVE +A
Sbjct: 751 IRYLGVVIDNQLSWKSHVEYCTTKA 775
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 133 PITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVE 35
P + D I ++YLG + ++++PHVE
Sbjct: 723 PFRVGDTIIHSKQSIRYLGVQIHDHLSWKPHVE 755
>AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 4.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 91 VKYLGFTLDRGMTFRPHVETVRDRAAF 11
V+YLG+ + G FRP ++ + A++
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASY 40
>AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 4.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 91 VKYLGFTLDRGMTFRPHVETVRDRAAF 11
V+YLG+ + G FRP ++ + A++
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASY 40
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 23.4 bits (48), Expect = 5.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 91 VKYLGFTLDRGMTFRPHVE 35
+KYLG +D + F+ H+E
Sbjct: 766 LKYLGVVIDDRLKFKSHLE 784
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,905
Number of Sequences: 2352
Number of extensions: 13445
Number of successful extensions: 36
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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