Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0778
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    38   0.011
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    37   0.019
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    36   0.033
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    36   0.033
AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      36   0.043
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    36   0.043
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    33   0.40 
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    30   2.9  
AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p pro...    30   2.9  

>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 133 PITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVETVRDR 20
           P+ + + P+P     KYLG  LDR +TF  HV  +R R
Sbjct: 731 PVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTR 768


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -3

Query: 154 VNTSAVSPITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVE 35
           +N     P+ L   P+P A +V YLG  LDR +T+R H+E
Sbjct: 717 LNRQDCPPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIE 756


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -3

Query: 154 VNTSAVSPITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVE 35
           +N     P+ L +  IP A +V YLG  LDR +T+R H+E
Sbjct: 715 LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIE 754


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -3

Query: 154 VNTSAVSPITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVE 35
           +N     P+ L +  IP A +V YLG  LDR +T+R H+E
Sbjct: 715 LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIE 754


>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 130 ITLFDQPIPWAPKVKYLGFTLDRGMTFRPHV 38
           + + D PI W   ++YLG   D+ +TF+ H+
Sbjct: 757 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHI 787


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 130 ITLFDQPIPWAPKVKYLGFTLDRGMTFRPHV 38
           + + D PI W   ++YLG   D+ +TF+ H+
Sbjct: 705 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHI 735


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p
           protein.
          Length = 906

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 136 SPITLFDQPIPWAPKVKYLGFTLDRGMTFRPHVETVRDR 20
           +PI L    +    + KYLG TLD+ +TF PH++    R
Sbjct: 736 APIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRR 774


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 88  KYLGFTLDRGMTFRPHVETVR 26
           KYLG TLDR +TF  H+  ++
Sbjct: 751 KYLGITLDRKLTFSRHITNIQ 771


>AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p
           protein.
          Length = 718

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 88  KYLGFTLDRGMTFRPHVETVR 26
           KYLG TLDR +TF  H+  ++
Sbjct: 553 KYLGITLDRKLTFSRHITNIQ 573


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,438,949
Number of Sequences: 53049
Number of extensions: 594399
Number of successful extensions: 1538
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)