Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0772
         (377 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p pro...    61   4e-10
AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-P...    61   4e-10
BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p pro...    31   0.65 

>AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p
           protein.
          Length = 446

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = +2

Query: 179 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 349
           ++ A V+VLGDIGRSPRMQYHA SL      V +I Y+ET PL E+  +P   + +L
Sbjct: 8   KRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPLEELTQHPRCRIHEL 64


>AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-PA
           protein.
          Length = 446

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = +2

Query: 179 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 349
           ++ A V+VLGDIGRSPRMQYHA SL      V +I Y+ET PL E+  +P   + +L
Sbjct: 8   KRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPLEELTQHPRCRIHEL 64


>BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p
           protein.
          Length = 168

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 19/71 (26%), Positives = 31/71 (43%)
 Frame = +2

Query: 140 SGFKEALMMLGNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVL 319
           SGF+  ++   +++ VA  +VL  I  S   +        + +D   I  V   P PE L
Sbjct: 4   SGFRSIMLRPSSLQAVAIAIVL--ISSSASAEVVNFEPCPDSVDTCTIQQVRVSPCPEAL 61

Query: 320 NNPHITVIKLH 352
           NN    + + H
Sbjct: 62  NNAACNIRRKH 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,984,954
Number of Sequences: 53049
Number of extensions: 316126
Number of successful extensions: 1025
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)