Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0772
(377 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 1.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 1.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 4.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 4.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 4.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 4.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 4.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 4.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 4.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 4.8
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 6.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 8.4
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 1.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 242 ALSLANNGLDVKIISYVETDPLPE 313
A ++A GLD+K +S+V LP+
Sbjct: 507 ATAVAARGLDIKNVSHVINYDLPK 530
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 1.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 242 ALSLANNGLDVKIISYVETDPLP 310
ALSL + L + ++E +P P
Sbjct: 681 ALSLGSEALSAATVRFIEAEPQP 703
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 214 YVPQYYNFSYFSHI 173
Y P YYN +Y I
Sbjct: 98 YKPLYYNINYIEQI 111
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 214 YVPQYYNFSYFSHI 173
Y P YYN +Y I
Sbjct: 98 YKPLYYNINYIEQI 111
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 214 YVPQYYNFSYFSHI 173
Y P YYN +Y I
Sbjct: 98 YKPLYYNINYIEQI 111
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 214 YVPQYYNFSYFSHI 173
Y P YYN +Y I
Sbjct: 98 YKPLYYNINYIEQI 111
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 214 YVPQYYNFSYFSHI 173
Y P YYN +Y I
Sbjct: 331 YKPLYYNINYIEQI 344
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 214 YVPQYYNFSYFSHI 173
Y P YYN +Y I
Sbjct: 331 YKPLYYNINYIEQI 344
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 214 YVPQYYNFSYFSHI 173
Y P YYN +Y I
Sbjct: 331 YKPLYYNINYIEQI 344
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 214 YVPQYYNFSYFSHI 173
Y P YYN +Y I
Sbjct: 320 YKPLYYNINYIEQI 333
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 20.6 bits (41), Expect = 6.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 239 DTAYGGSSLCPPVL 198
D A GG CPP +
Sbjct: 268 DIAKGGKLACPPAI 281
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.2 bits (40), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 180 LTLPNIMRASLKPELLRNDLWYRI 109
LTL I+ K +LL +LW ++
Sbjct: 55 LTLMQIIDVDEKNQLLITNLWLKL 78
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,267
Number of Sequences: 438
Number of extensions: 2289
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9176370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -