Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0771
(820 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 350 1e-97
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 202 4e-53
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 186 3e-48
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 144 1e-35
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 107 2e-24
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 105 8e-24
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 97 3e-21
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 54 2e-08
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 36 0.007
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 33 0.049
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.11
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.20
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.45
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.4
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 28 1.4
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.2
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 27 3.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.2
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 4.2
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.6
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 26 7.4
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.4
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.4
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 9.8
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 25 9.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 350 bits (861), Expect = 1e-97
Identities = 159/171 (92%), Positives = 166/171 (97%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 252 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 431
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 432 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 584
I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALP
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALP 172
Score = 68.5 bits (160), Expect = 1e-12
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 683 EREIVRDIKEKLCYLALDFEQEMATAAFSSFLEKSYEL 796
EREIVRDIKEKLCY+ALDFEQE+ TAA SS LEKSYEL
Sbjct: 205 EREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYEL 242
Score = 65.7 bits (153), Expect = 7e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 583 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 681
PHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTA
Sbjct: 172 PHAIMRLDLAGRDLTDYLMKILMERGYTFSTTA 204
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 202 bits (494), Expect = 4e-53
Identities = 89/166 (53%), Positives = 124/166 (74%), Gaps = 1/166 (0%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 269
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 270 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 446
+ PIE GI+ NW DME+IW + + + +L PEEHP+LLTE PL N+EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 447 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 584
N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIP 177
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 683 EREIVRDIKEKLCYLALDFEQEM 751
E+EIVR+IKEK CY+A DF E+
Sbjct: 210 EKEIVREIKEKCCYVASDFRSEI 232
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 583 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 681
P AI + ++ GRD+TDYL L + G+ ++A
Sbjct: 177 PSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSA 209
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 186 bits (453), Expect = 3e-48
Identities = 86/170 (50%), Positives = 122/170 (71%), Gaps = 2/170 (1%)
Frame = +3
Query: 78 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 251
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 252 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 431
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 432 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 581
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVL 171
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 586 HAILRLDLAGRDLTDYLMKILTERGYSFTTTA 681
H + RLD+AGRD T YL+ +L +GY+F TA
Sbjct: 173 HLVGRLDVAGRDATRYLISLLLRKGYAFNRTA 204
Score = 33.1 bits (72), Expect = 0.049
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 689 EIVRDIKEKLCYLALDFEQEMATAAFSSFLEKSYEL 796
E VR++KEKLCY++ D E + + ++ L ++Y L
Sbjct: 207 ETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTL 242
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 144 bits (349), Expect = 1e-35
Identities = 80/196 (40%), Positives = 111/196 (56%), Gaps = 32/196 (16%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 218
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 219 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 377
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 378 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 533
LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186
Query: 534 GDGVSHTVPIYEGYAL 581
GDGV+H +P+ EGY +
Sbjct: 187 GDGVTHIIPVAEGYVI 202
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 107 bits (257), Expect = 2e-24
Identities = 60/169 (35%), Positives = 91/169 (53%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 255 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 434
G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K +
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120
Query: 435 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 581
MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 105 bits (252), Expect = 8e-24
Identities = 54/164 (32%), Positives = 96/164 (58%), Gaps = 3/164 (1%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 269
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82
Query: 270 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 446
+ P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 447 FNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEG 572
+N P++ I + S Y + + ++GIVL+ G+ SH +P+ G
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNG 185
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 96.7 bits (230), Expect = 3e-21
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 255 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 428
I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121
Query: 429 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 572
+ FE + PA Y+ QAV +A+ ++T +++D G + P+ +G
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDG 169
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 54.4 bits (125), Expect = 2e-08
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 276 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 443
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 444 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 572
P +A + ++ LYA G G+V+D G + PI +G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDG 214
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 35.9 bits (79), Expect = 0.007
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 18/178 (10%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 269
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 270 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIM 437
++ H G + +W +W N + P ++ +LLT+ + Q++
Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117
Query: 438 FETFNTPAMYVAIQAVLSLYASGRTT--------------GIVLDSGDGVSHTVPIYE 569
FE F A A L + G T +V+DSG +H +P+ +
Sbjct: 118 FEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVID 175
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 683 EREIVRDIKEKLCYLALDFEQEM 751
E IV +IKE +CY++ +F+++M
Sbjct: 211 ETYIVNEIKESVCYVSQNFKEDM 233
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 589 AILRLDLAGRDLTDYLMKILTERGYS 666
A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 182 AVKRVDVGGKLLTNYLKEVISYRKYN 207
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 33.1 bits (72), Expect = 0.049
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 721 LPRSRLRAGDGHRCIQQLPRKVLRTFPTVRS 813
+P S+L A +C+Q LP K +FP+VR+
Sbjct: 501 IPASKLMATSLKKCVQSLPEKYAHSFPSVRN 531
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 336 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 479
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.20
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 135 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 278
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.45
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 232 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 71
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 436 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDT 576
C+ ++ PP T S S P VPP S T +T P P ST T
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTS--TSSTSIPIPPTSTSST 158
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 436 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDT 576
C+ ++ PP T S S P VPP S T +T P P ST T
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTS--TSSTSIPIPPTSTSST 215
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 481 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHFP 585
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 460 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHFP 585
P T+P P T PV P S P+ P P PS+ P
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIP 1077
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 762 AAVAISCSKSRAR*HSFSLMSRTISRSG 679
A ++S SKS+A H S SR S+SG
Sbjct: 1278 ARTSVSRSKSKAERHETSTSSRKSSKSG 1305
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 702 TSRRSCATSLSTSSRRWPPLHSAASSKSLTNFPD 803
TSR + A+SLS++S H + SS +T PD
Sbjct: 495 TSRTNTASSLSSTSEDQVSTHGSISSAKVTAIPD 528
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 481 PCSRCTRPVVPPVSCWTPATVSPTPCPST 567
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 723 TSLSTSSRRWPPLHSAASSKSLTNFPDGQVIT 818
++L TSS + HSA SS+ ++++P+ VIT
Sbjct: 396 STLKTSSVKTRRSHSAQSSRKVSDYPNMVVIT 427
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 457 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 564
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 235 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 119
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 243 VPHLLHKSPSVPYRPSRPDGGAFPRSRET 157
+ L+ K+PS PY SRP A S T
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPT 334
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 378 LLTEAPLNPKANREKMTQIMFETFN 452
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 649 TERGYSFTTTARAGNRS*HQGEAVLPRSRLRAGDG 753
T +G S T R+ N H G+ P R+ DG
Sbjct: 126 TSQGASLLLTQRSPNLRSHAGQMCFPGGRVEPSDG 160
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 117 TYRSHCLLPTRQLLRRTS*ISEI 49
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 272 FEGQDTSFALCLISYIRVLLSHTDHHA 192
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 392 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRR 541
+PQ + E++ D++R++ +RH RR P +A + R H + R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 478 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHFPHAILR 600
KP S+ TRP +P + T +V P P P + I R
Sbjct: 65 KPSSKATRPYIPSYTRLT-YSVPPLPIPPPSEQSLDTIIYR 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,625,011
Number of Sequences: 5004
Number of extensions: 81373
Number of successful extensions: 293
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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