Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0766
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.2  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.6  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   9.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 392 LARFYFLLNSNTP 430
           L  FYF+LN N P
Sbjct: 228 LNHFYFMLNHNYP 240


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 430 LYNIL*-LKAVFFYIVTTVLSDFYTIL 507
           +Y IL  +  VF+Y+ TTV    Y I+
Sbjct: 325 IYTILTYMSGVFYYLSTTVNPLLYNIM 351


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 341 VTSSLHTLKNYTTFLYMLVPINLNV 267
           + + +HTL N   FL+ L+  N  V
Sbjct: 328 IAAGIHTLGNTLVFLFDLIGRNPTV 352


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 392 LARFYFLLNSNTP 430
           L  FYF+LN N P
Sbjct: 228 LNHFYFMLNHNYP 240


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 468 YSNNSSKRLLYY 503
           Y+NN+ K+L YY
Sbjct: 102 YNNNNYKKLQYY 113


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 468 YSNNSSKRLLYY 503
           Y+NN+ K+L YY
Sbjct: 102 YNNNNYKKLQYY 113


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 468 YSNNSSKRLLYY 503
           Y+NN+ K+L YY
Sbjct: 102 YNNNNYKKLQYY 113


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 468 YSNNSSKRLLYY 503
           Y+NN+ K+L YY
Sbjct: 102 YNNNNYKKLQYY 113


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 359 KKK*SDVTSSLHTLKNYTTFLYMLVPINLNVN 264
           K K   + SSL    NY  +     P++ N+N
Sbjct: 308 KSKEPKIISSLSNNYNYNNYNNNYKPLHYNIN 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,328
Number of Sequences: 438
Number of extensions: 3820
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)