Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0764
         (415 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    26   0.13 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   3.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   3.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.3  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   8.3  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 71  LKLSIYDISLLFIWLFAFH-LHPCGYILDHSDLLAPVVVCVDGCL 202
           LKLSI  ISL+ +W+F  + L  C  IL   D +  ++  V   L
Sbjct: 193 LKLSINIISLVQLWIFQLYLLILCDQILREFDQIVVILSKVKSIL 237


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = +1

Query: 250 NQSIFICLSDLFLLFISWWQLVLCYTSF 333
           N ++++    + L+ + WW+  +  TS+
Sbjct: 7   NPTLYLIPVSVILISVGWWENFVSETSY 34


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = +1

Query: 250 NQSIFICLSDLFLLFISWWQLVLCYTSF 333
           N ++++    + L+ + WW+  +  TS+
Sbjct: 240 NPTLYLIPVSVILISVGWWENFVSETSY 267


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = +1

Query: 250 NQSIFICLSDLFLLFISWWQLVLCYTSF 333
           N ++++    + L+ + WW+  +  TS+
Sbjct: 240 NPTLYLIPVSVILISVGWWENFVSETSY 267


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 290 FSFLGGNWFYVILLLRTKPS 349
           FS LGG   Y+I+L++   S
Sbjct: 636 FSILGGVTTYIIILIQLATS 655


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 290 FSFLGGNWFYVILLLRTKPS 349
           FS LGG   Y+I+L++   S
Sbjct: 361 FSILGGVTTYIIILIQLATS 380


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 105 LYGYSLSIYIPVAIFWTI 158
           LYG+ L + I   + WTI
Sbjct: 231 LYGHQLLLTILTYLIWTI 248


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 415 KVQIRSCSTSSPDGVTGTPGALTGF 341
           K  +++   S  +   GTPG  +GF
Sbjct: 177 KKMMKAAQVSGGNNNNGTPGGHSGF 201


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 70  VCVSISSCPSGSVVHFKT 17
           +C  + SC S   +H++T
Sbjct: 139 ICHRVLSCKSALQMHYRT 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,508
Number of Sequences: 336
Number of extensions: 2781
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)