Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0763
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.64 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 129 VFPALILSIRVDRQPNLITRVRRYHTNNFA 218
           VF  L+    +D  PN +T  + Y+ N FA
Sbjct: 332 VFVILVYYASLDETPNPVTNGKLYNFNTFA 361


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 376 LSYILYY*MHHLCLSLITYMKMMKVKFI 459
           ++YIL      +C   I  +KM+K++F+
Sbjct: 442 MAYILLAMNSAVCHQTIELVKMLKIRFV 469


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 376 LSYILYY*MHHLCLSLITYMKMMKVKFI 459
           ++YIL      +C   I  +KM+K++F+
Sbjct: 167 MAYILLAMNSAVCHQTIELVKMLKIRFV 194


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 193 ADITPIISLPTLRPGVYWIK*KSHS 267
           A ++P+IS  +  PGV+ +    HS
Sbjct: 175 ASVSPLISSSSSPPGVFPVDAPMHS 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,916
Number of Sequences: 336
Number of extensions: 3593
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)