Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0763
         (748 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,117...    29   3.9  
01_01_0501 - 3682100-3682148,3682263-3682341,3682434-3682511,368...    29   5.2  
08_02_1047 - 23927822-23928112,23928736-23928981,23929119-239293...    28   9.1  

>03_01_0149 -
           1175689-1176258,1176345-1176509,1176631-1177539,
           1178179-1178378,1178505-1178605,1178747-1179369,
           1179451-1179546,1179637-1179798,1179889-1180068,
           1180173-1180323,1180408-1180641,1180753-1180913,
           1181041-1181163,1181261-1181421,1181655-1181877,
           1181952-1182346,1182461-1182671,1183536-1184522
          Length = 1883

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 260 PTLNTGTSDWFPAEIDRKVDAISKNS 337
           P ++TG  D F AEIDR +++I+  S
Sbjct: 48  PAMDTGADDGFVAEIDRILESINAES 73


>01_01_0501 -
           3682100-3682148,3682263-3682341,3682434-3682511,
           3682770-3682866,3682944-3683029,3683310-3683381,
           3683451-3683520,3683988-3684110,3684212-3684370,
           3684443-3684730,3685652-3685725,3686107-3686344
          Length = 470

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 322 NIKEFIFKEYSLILRKKDLSYILYY*MHHLCLSLITYM 435
           +I   I+  YS++  KKDL+  L      LC+S  TY+
Sbjct: 151 SINSIIWLTYSIMASKKDLNLALILMHALLCMSTFTYL 188


>08_02_1047 -
           23927822-23928112,23928736-23928981,23929119-23929395,
           23929522-23929799,23931147-23931572
          Length = 505

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 86  VATTTELWSNNKCLSLP 136
           + TTTE W++++CL LP
Sbjct: 261 IMTTTEFWTSHECLLLP 277


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,364,988
Number of Sequences: 37544
Number of extensions: 292599
Number of successful extensions: 455
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)