Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0763
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.3  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    24   1.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   5.3  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   5.3  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   7.0  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   7.0  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   9.3  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 269 NTGTSDWFPAEIDRKVDAI 325
           N   + W PA++DR ++AI
Sbjct: 514 NASPTTWSPADLDRALEAI 532


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 726 NKLINKINNFMCNRYHNHSK 667
           NK I+  NN+  N Y+N+ K
Sbjct: 87  NKTIHNNNNYNNNNYNNYKK 106


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 243 VDTRSQCG*RNYWCDIC 193
           V TR+  G + Y CDIC
Sbjct: 221 VHTRTHTGEKPYTCDIC 237


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 726 NKLINKINNFMCNRYHNHS 670
           NK I+  NN+  N Y+N++
Sbjct: 87  NKTIHNNNNYNNNNYNNYN 105


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 714 NKINNFMCNRYHNHSKR 664
           N  NN+  N Y+N++K+
Sbjct: 328 NNYNNYNNNNYNNYNKK 344


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 726 NKLINKINNFMCNRYHNHSK 667
           N   N  NN+  N Y+N+ K
Sbjct: 332 NNYNNNYNNYNNNNYNNYKK 351



 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 726 NKLINKINNFMCNRYHNH 673
           NK I+  NN+  N Y+N+
Sbjct: 320 NKTIHNNNNYNNNNYNNN 337


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 568 NCL*TILFVECYYKINYKK 512
           +C  T  +V+C+YK N +K
Sbjct: 121 DCQKTYQYVQCHYKQNPEK 139


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +1

Query: 298 RNR*ESGCNIKEFIFKEYSLILRKKDLSYILYY*MHHLC 414
           + R +   N  + +       ++ KD +  +Y+ M+HLC
Sbjct: 8   KKRRKKNLNQNQMMIWALDCSIKPKDHNGSIYWSMYHLC 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,172
Number of Sequences: 438
Number of extensions: 4019
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)