Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0762
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q67T45 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_A0HKQ4 Cluster: Periplasmic sensor hybrid histidine kin...    34   2.9  
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    33   3.8  

>UniRef50_Q67T45 Cluster: Putative uncharacterized protein; n=1;
           Symbiobacterium thermophilum|Rep: Putative
           uncharacterized protein - Symbiobacterium thermophilum
          Length = 921

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = -3

Query: 188 SWPVYIGIGRNEIGRRPALTARFGPTPTPLGDRRLLVIKLTYVPE 54
           SWP    +G + IGR  A  A  G   TP G  RL V+    VPE
Sbjct: 135 SWPNGAVVGTDRIGRL-ATVALDGTVTTPYGSHRLTVVNTPVVPE 178


>UniRef50_A0HKQ4 Cluster: Periplasmic sensor hybrid histidine kinase
           precursor; n=1; Comamonas testosteroni KF-1|Rep:
           Periplasmic sensor hybrid histidine kinase precursor -
           Comamonas testosteroni KF-1
          Length = 626

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = -2

Query: 213 LIALGYFLFVASVHRDW-SQ*NWKAPRVDSSI 121
           L+ALG+ LF  S+HR W S  +W+ PR+ +++
Sbjct: 82  LMALGFLLFRRSLHRQWRSARDWEPPRLQAAL 113


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 554 RGGARYPIRPIVSR 595
           RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,744,175
Number of Sequences: 1657284
Number of extensions: 9021393
Number of successful extensions: 22475
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22472
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)