Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0762
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.              31   4.1  
M92299-1|AAA52682.1|  269|Homo sapiens homeobox protein protein.       29   9.4  
BC117247-1|AAI17248.1|  269|Homo sapiens homeobox B5 protein.          29   9.4  
AF287967-3|AAG31553.1|  269|Homo sapiens homeobox B5 protein.          29   9.4  

>AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.
          Length = 353

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 538 KKKKNSRGGPVPNS 579
           KKKKNSRGGPVP +
Sbjct: 47  KKKKNSRGGPVPGN 60


>M92299-1|AAA52682.1|  269|Homo sapiens homeobox protein protein.
          Length = 269

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 87  APVSERRRRWTESSCQRGAPSNFIATNPDVHWPRTKSS 200
           AP  E R R   SSC   +P +   TN D H  +  +S
Sbjct: 78  APAQEPRFRQAASSCSLSSPESLPCTNGDSHGAKPSAS 115


>BC117247-1|AAI17248.1|  269|Homo sapiens homeobox B5 protein.
          Length = 269

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 87  APVSERRRRWTESSCQRGAPSNFIATNPDVHWPRTKSS 200
           AP  E R R   SSC   +P +   TN D H  +  +S
Sbjct: 78  APAQEPRFRQAASSCSLSSPESLPCTNGDSHGAKPSAS 115


>AF287967-3|AAG31553.1|  269|Homo sapiens homeobox B5 protein.
          Length = 269

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 87  APVSERRRRWTESSCQRGAPSNFIATNPDVHWPRTKSS 200
           AP  E R R   SSC   +P +   TN D H  +  +S
Sbjct: 78  APAQEPRFRQAASSCSLSSPESLPCTNGDSHGAKPSAS 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,105,844
Number of Sequences: 237096
Number of extensions: 1313622
Number of successful extensions: 2672
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2672
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)