Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0759
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 442 e-125
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 423 e-120
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 353 1e-98
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 252 3e-68
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 247 1e-66
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 234 7e-63
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 232 3e-62
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 225 5e-60
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 213 3e-56
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 167 1e-42
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.61
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.61
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 28 1.1
SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 26 4.3
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 4.3
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 4.3
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 26 4.3
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 5.7
SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 9.9
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 25 9.9
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 442 bits (1088), Expect = e-125
Identities = 194/223 (86%), Positives = 209/223 (93%)
Frame = +3
Query: 3 EIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLG 182
E EI+ LC K+REIF+SQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPE+NYLFLG
Sbjct: 31 EDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPEANYLFLG 90
Query: 183 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKT 362
DYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNHECASINRIYGFYDECKRRYNIKLWKT
Sbjct: 91 DYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKT 150
Query: 363 FTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 542
FTDCFNCLP+AAI+DEKIF HGGLSPDL +M+QI+RIMRPTDVPD GLLCDLLWSDPDK
Sbjct: 151 FTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQIQRIMRPTDVPDTGLLCDLLWSDPDK 210
Query: 543 DTAGWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
D GWG+NDRGVSFTFG +VV +FL KH+ DL+CRAHQVVEDG
Sbjct: 211 DLTGWGDNDRGVSFTFGPDVVSRFLHKHDMDLVCRAHQVVEDG 253
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 423 bits (1043), Expect = e-120
Identities = 183/223 (82%), Positives = 205/223 (91%)
Frame = +3
Query: 3 EIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLG 182
+ EI+ LC SR IFLSQP+LLELEAPLKICGDIHGQY DLLRLFEYGG+PP++NYLFLG
Sbjct: 28 DAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANYLFLG 87
Query: 183 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKT 362
DYVDRGKQSLE ICLL AYKIKYPENFFLLRGNHE ASINRIYGFYDECKRRY+IKLWKT
Sbjct: 88 DYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRYSIKLWKT 147
Query: 363 FTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 542
FTDCFNC+PVAA++DEKIFC HGGLSPDL +++QI+RI+RPTD+PD GLLCDL+WSDP+K
Sbjct: 148 FTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIRPTDIPDTGLLCDLVWSDPEK 207
Query: 543 DTAGWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
D GWGENDRGVS+TFG +VV +FL KH+ DLICRAHQVVEDG
Sbjct: 208 DLTGWGENDRGVSYTFGADVVSRFLQKHDLDLICRAHQVVEDG 250
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 353 bits (868), Expect = 1e-98
Identities = 158/221 (71%), Positives = 178/221 (80%)
Frame = +3
Query: 9 EIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDY 188
EI +C+ REIFLSQP LLEL P+KI GD+HGQY DL+RLFE GFPP SNYLFLGDY
Sbjct: 218 EITSICMAVREIFLSQPTLLELTPPVKIVGDVHGQYSDLIRLFEMCGFPPSSNYLFLGDY 277
Query: 189 VDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFT 368
VDRGKQSLETI LL YKI+YPENFFLLRGNHECA+I R+YGFYDECKRR NIK+WKTF
Sbjct: 278 VDRGKQSLETILLLFLYKIRYPENFFLLRGNHECANITRVYGFYDECKRRCNIKIWKTFI 337
Query: 369 DCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDT 548
+ FNCLP+A++V KIFC HGGLSP L M+ IR I RPTDVPD GLL DLLWSDP
Sbjct: 338 NTFNCLPIASVVAGKIFCVHGGLSPSLSHMDDIREIPRPTDVPDYGLLNDLLWSDPADTE 397
Query: 549 AGWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
W +N+RGVSF F V+ +FL+KH+FDLICRAH VVEDG
Sbjct: 398 NDWEDNERGVSFVFNKNVIRQFLAKHDFDLICRAHMVVEDG 438
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 252 bits (618), Expect = 3e-68
Identities = 106/224 (47%), Positives = 157/224 (70%), Gaps = 1/224 (0%)
Frame = +3
Query: 3 EIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLG 182
E ++ +C ++E+ + + + P+ +CGDIHGQ++DL+ LF GG P++NYLF+G
Sbjct: 25 EEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLFMG 84
Query: 183 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWK 359
DYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +W+
Sbjct: 85 DYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWQ 144
Query: 360 TFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPD 539
FTD F+ LP+ A+++++IFC HGGLSP + ++ +R + R +VP +G +CDLLWSDPD
Sbjct: 145 YFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWSDPD 204
Query: 540 KDTAGWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
D GWG + RG +TFG ++ F + DLI RAHQ+V +G
Sbjct: 205 -DRPGWGISPRGAGYTFGPDIAEAFNHNNGLDLIARAHQLVMEG 247
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 247 bits (604), Expect = 1e-66
Identities = 104/224 (46%), Positives = 155/224 (69%), Gaps = 1/224 (0%)
Frame = +3
Query: 3 EIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLG 182
E +++ LC K+RE+ + + + P+ +CGDIHGQ++DL+ LF+ GG P+ NYLF+G
Sbjct: 38 EADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLFMG 97
Query: 183 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWK 359
DYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y + +WK
Sbjct: 98 DYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANVWK 157
Query: 360 TFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPD 539
FT+ F+ P+ A+++++IFC HGGLSP + +++ +R + R +VP +G +CDLLWSDPD
Sbjct: 158 HFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWSDPD 217
Query: 540 KDTAGWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
D GWG + RG +TFG ++ F + L RAHQ+V +G
Sbjct: 218 -DRCGWGISPRGAGYTFGQDISETFNHANGLSLTARAHQLVMEG 260
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 234 bits (573), Expect = 7e-63
Identities = 106/224 (47%), Positives = 148/224 (66%), Gaps = 1/224 (0%)
Frame = +3
Query: 3 EIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLG 182
E + LC + R+I + + + + +P+ ICGDIHGQ +DLL LF GG P + YLFLG
Sbjct: 21 ESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLFLG 80
Query: 183 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWK 359
D+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +W+
Sbjct: 81 DFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWR 140
Query: 360 TFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPD 539
+ F+ L + A+VD K+FC HGGLSP + +++QIR + R +VP +G +CDLLWSDP+
Sbjct: 141 YCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSDPE 200
Query: 540 KDTAGWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
D +GWG + RG F FG +V F ++ I RAHQ+V +G
Sbjct: 201 -DISGWGLSPRGAGFLFGADVSEVFNRANDLSFIARAHQLVMEG 243
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 232 bits (568), Expect = 3e-62
Identities = 101/224 (45%), Positives = 148/224 (66%), Gaps = 1/224 (0%)
Frame = +3
Query: 3 EIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLG 182
E ++K LC + I + + + + P+ +CGDIHGQ+YDLL LF GG P +NY+F+G
Sbjct: 19 EHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIFMG 78
Query: 183 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWK 359
D+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y N +WK
Sbjct: 79 DFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANVWK 138
Query: 360 TFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPD 539
F+ L +AA++D KI C HGGLSP+++ ++QIR + R ++P +G CDL+WSDP+
Sbjct: 139 YCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWSDPE 198
Query: 540 KDTAGWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
D W + RG + FG++V +F ++ LI RAHQ+V++G
Sbjct: 199 -DIESWTVSPRGAGWLFGSKVTTEFSQINDLTLIARAHQLVQEG 241
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 225 bits (550), Expect = 5e-60
Identities = 104/224 (46%), Positives = 144/224 (64%), Gaps = 1/224 (0%)
Frame = +3
Query: 3 EIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLG 182
E I LC ++E+ + + ++ L P+ + GDIHGQ+ DLL +F GG P +NYLFLG
Sbjct: 19 ESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEIFRIGGPCPYTNYLFLG 78
Query: 183 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWK 359
DYVDRG S+ETI LL+ K++YP+ LLRGNHE I + YGFY EC R+Y N +WK
Sbjct: 79 DYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYGFYSECLRKYGNANVWK 138
Query: 360 TFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPD 539
FTD F+ L ++A +D+ IFC HGGLSP +Q ++QI + R + P +G + DL+WSDPD
Sbjct: 139 YFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQILVLDRFREFPHEGPMADLVWSDPD 198
Query: 540 KDTAGWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
+ + RG F+FG +V KFL + I RAHQ+ +G
Sbjct: 199 PSVQEFSLSPRGAGFSFGEVIVTKFLEYNNMKHILRAHQLCSEG 242
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 213 bits (519), Expect = 3e-56
Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 7/221 (3%)
Frame = +3
Query: 30 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 209
K+ EI S+ L+E++AP+ +CGDIHGQYYDL++LFE GG P + YLFLGDYVDRG S
Sbjct: 96 KATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYLFLGDYVDRGYFS 155
Query: 210 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 389
+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+++ FN LP
Sbjct: 156 IECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKVYEACLQSFNALP 215
Query: 390 VAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGEND 569
+AAI++++ C HGGLSP+L + IR I R + P GL+CDLLWSDP +D N
Sbjct: 216 LAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSDPLEDFGSEKSNK 275
Query: 570 -------RGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
RG S+ + + V FL + + RAH+ + G
Sbjct: 276 HFIHNNVRGCSYFYSYQAVCTFLENNNLLSVIRAHEAQDVG 316
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 167 bits (406), Expect = 1e-42
Identities = 85/220 (38%), Positives = 130/220 (59%), Gaps = 8/220 (3%)
Frame = +3
Query: 36 REIFLSQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRG 200
+E+ P L+++ + L ICGD HGQY+DLL +F+ G P P + YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 201 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 380
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 381 CLPVAAIVDEKIFCCHGGL-SPDLQAMEQIRRIMR-PTDVPDQ-GLLCDLLWSDPDKDTA 551
LP+ +++ + HGGL S D ++Q+R I R P Q GL+ ++LW+DP +
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP-QPAP 370
Query: 552 GWGENDRGVSFTFGTEVVGKFLSKHEFDLICRAHQVVEDG 671
G G + RGV FG +V +F + + R+H+V + G
Sbjct: 371 GRGPSKRGVGLQFGPDVSKRFCEANGLKAVIRSHEVRDQG 410
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.1 bits (62), Expect = 0.61
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 369 DCFNCLPVAAIVDEKIFCC-HGGLSPD 446
D ++C+ + A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 29.1 bits (62), Expect = 0.61
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 6 IEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRL------FEYGGFPPESN 167
+++K + ++ +FL+ P + +LE L+ G + L RL EY P +
Sbjct: 122 LQVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFD 180
Query: 168 YLFLGDYVDRGKQSLETICL 227
L + D V++ + LE ICL
Sbjct: 181 ALIVNDDVEKAYKQLEAICL 200
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 608 AHDFGSKSEADSAIVLAPAGRVLVGVGPEQVAEQALVGHVCRPHDPPDLFHSLQVRRQTA 429
+HDF SK +A+ A P + ++ +V + PP LFH L + A
Sbjct: 43 SHDFESKEDAEGMNKDESAPSPSTS-SPSSASSRSQSKYVRKEALPPQLFHHLDSAKDKA 101
Query: 428 VTT 420
+TT
Sbjct: 102 LTT 104
>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 721
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 543 DTAGWGENDRGVSFTFGTEV 602
D GWG + GVS FGT +
Sbjct: 134 DDGGWGIHTEGVSTVFGTSM 153
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 246 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 389
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 103 MSPQIFKGASSSSSIGCDKNISLD 32
+S Q+FK SS S + CD+ ++D
Sbjct: 567 VSVQVFKDGSSDSEVRCDEYAAVD 590
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 263 EILGIFNLVGEEQAYCFQGLLATVHIVSKEEIVG 162
EIL I + E C QGL IV KE VG
Sbjct: 258 EILEILDTAEETLRSCIQGLNIDAKIVRKERSVG 291
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 147 GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 251
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 126 RGHSIVHVCHRKFSKELQV 70
RG HVCHRK + L+V
Sbjct: 55 RGFRTCHVCHRKNNMRLKV 73
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 470 PDLFHSLQVRRQTAVTTE 417
P+ H LQ R+QT TTE
Sbjct: 965 PEQIHQLQQRKQTVPTTE 982
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,770,090
Number of Sequences: 5004
Number of extensions: 58129
Number of successful extensions: 178
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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