Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0758
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   5.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   6.9  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory
          receptor candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 39 INKVFNKCGEV 71
          +N +FN CGEV
Sbjct: 64 VNLIFNTCGEV 74


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = -1

Query: 340 VSNCDNDMTSTSGSCSTAGKANASGSCNSGL---ELNKFIISLPGEA 209
           V  C N+  +   +C   G+ + SGS +      +  K+ I L G A
Sbjct: 143 VPECKNEEVAGGFTCPAPGEVSNSGSFSRHAHPDDCRKYYICLEGTA 189


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = -1

Query: 340 VSNCDNDMTSTSGSCSTAGKANASGSCNSGL---ELNKFIISLPGEA 209
           V  C N+  +   +C   G+ + SGS +      +  K+ I L G A
Sbjct: 143 VPECKNEEVAGGFTCPAPGEVSNSGSFSRHAHPDDCRKYYICLEGTA 189


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 337 SNCDNDMTSTSGSCSTAGK 281
           S+CD+      G+C   GK
Sbjct: 146 SHCDHTTCKNGGTCQDLGK 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,989
Number of Sequences: 336
Number of extensions: 2698
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)