Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0758
         (670 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF006521-1|AAB62916.1|  122|Homo sapiens immunoglobulin heavy ch...    31   4.9  
AK095945-1|BAC04658.1|  184|Homo sapiens protein ( Homo sapiens ...    30   8.6  

>AF006521-1|AAB62916.1|  122|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 122

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 233 ELIEFKAGIAAPGG-IRFSCRAARPRCTRHIIITIR 337
           +L+EF  G+  PGG +R SC A     +RH +I +R
Sbjct: 3   QLVEFGGGLVQPGGSLRLSCDATGFIFSRHDMIWVR 38


>AK095945-1|BAC04658.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38626 fis, clone HEART2009599. ).
          Length = 184

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 315 RVHRGLAARQEKRMPPGAAIPALNSISSLFLCRERQVSN-LTYPSGSTSG 169
           R  RG   R+ +R+P    +P+L S SS  L R R     LT  S + SG
Sbjct: 12  RAARGRGGRRGQRLPGSPTLPSL-SFSSAILLRSRSPGRCLTITSAAVSG 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,149,293
Number of Sequences: 237096
Number of extensions: 1650452
Number of successful extensions: 3304
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3304
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)